Osaka server at the National Institute of Biomedical Innovation (preferred)
(Cambridge server at the University of Cambridge no longer available)
1032 families / 3454 structures (13600 single-member families)
updated on 29 Sep 2014
HOMSTRAD (HOMologous STRucture Alignment Database) is a curated database of structure-based alignments for homologous protein families. All known protein structure are clustered into homologous families (i.e., common ancestry), and the sequences of representative members of each family are aligned on the basis of their 3D structures using the programs MNYFIT, STAMP and COMPARER. These structure-based alignments are annotated with JOY and examined individually.
The database provides annotated structural alignments in various formats, superimposed structures, links to other databases and the alignment and searching interface to the program FUGUE. See the following documents for further details.
Copyright (C) 1997-2010 The HOMSTRAD authors firstname.lastname@example.org
Created: 9 Jul 1997
Last modified: 29 Sep 2014