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Align your sequence(s)

zinc metalloproteinase, thermolysin-like

class : multi domain number of structures : 4 average size : 308 average PID : 44 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1npc rasmol 1 - 317 - neutral protease Bacillus cereus 2.00 17.50
8tln rasmol 1 E 323 D thermolysin Bacillus thermoproteolyticus 1.60 16.50
1ezm rasmol 1 - 298 - elastase Pseudomonas aeruginosa 1.50 18.00
1bqb rasmol 1 A 301 A zinc metalloproteinase aureolysin Staphylococcus aureus 1.72 17.6
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Peptidase_M4_C  Peptidase_M4  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1npc   (   1 )    vtgtnkvgtGkGv---lgd------tKsLnTTlsgssyyLqDntrgAtIf
8tlne  (   1 )    itgtstvgvGrGV---lgd------qknInTTys-tyyyLQDntrgdGIf
1ezm   (   1 )         aeAggpGGnqkigkytYgsdygpLiVnd---rçeMddg----nVi
1bqba  (   1 )       aaatgtGkGV---lgd------tkdinInsidggfSLEDlthqGkLs
                      bbbbbbb              bbbbbbbb    bb bb      bb

                           60        70        80        90        100 
1npc   (  42 )    TydAknrstlpg-tlwadadnvFna----aydaAAVDAHyYAGkTYdyYk
8tlne  (  41 )    TydAkyrttlpg-slWadadnqFfa----sydaPAVDAHyYAGvTydYYk
1ezm   (  39 )    TVdMnsstddskttpfrfaçptNtykqvngaySPLNDAHfFGgVVfkLYr
1bqba  (  39 )    AynFndqtgq-a-tlItNedenFvk----ddQrAGVDAnyyAkqTYdyYk
                  bbb          bb bb   bb      333aaaaaaaaaaaaaaaaaa

                           110       120       130       140       150 
1npc   (  87 )    atfnRnSindagapLkSTVhygs-----nynnAfWngsqMVYGdGdgvtf
8tlne  (  86 )    nvHnrlSydgnnaaIrSSVHysq-----gynnAfWngseMVYGdGdgqtF
1ezm   (  89 )    dwFgtsPLt---hkLyMKVHyGr-----svenaywdgtaMlFGdGa-tmf
1bqba  (  83 )    ntFgReSydnhGspIvSlThVNhyggqdnrnnAaWigdkMIYGdGdgrtf
                  aaa           bbbbb             bbb    bbb        

                           160       170       180       190       200 
1npc   ( 132 )    tsLSGGIDvIGHeLThAVTensSnLiyqneSGALnEAISDIFGTLVEfyd
8tlne  ( 131 )    ipLSGGIDVVAHELThAVTdytAgLiyqnesGAINEAISDIFGTLVEfya
1ezm   ( 130 )    yPLV-SLDvAAHeVShgFTeqnsgLiyrgqSGGMnEAFSDMAGEAAEfyM
1bqba  ( 133 )    tnLSGAnDvVAHeIThGVTqqtAnLeykdqsGALnESFSDVFGyFVDd--
                    333 aaaaaaaaaaaaaaa       aaaaaaaaaaaaaaaaaaaaa 

                           210       220       230       240       250 
1npc   ( 182 )    nrnpdweIGedIytpgkagdAlrSMsdPtkyg-dpdhyskrytgssdnGG
8tlne  ( 181 )    nknpdweIGedVytpgisgdSlRSMsdPakyg-dpdhyskrytgtqdngG
1ezm   ( 179 )    rgkNdflIGydIkk---gsgAlryMdqPsrdgrSidnasqyyn----gId
1bqba  ( 181 )    ---edflMGedVytpgkegdAlrSMsnPeqfg-QpshmkdYvytekdngG
                        bb              bb   3333      333     aaaaa

                           260       270       280       290       300 
1npc   ( 231 )    VhtnSgIINkQAyLLAnggthygvtVtGigkdkLgaIYyrANtqyFtqsT
8tlne  ( 230 )    VhinSgIINkAAyLISqggthygvsVvgigrdkLGkIFyrALtqyLtptS
1ezm   ( 222 )    vhhSSGVYNrAFylLAnsp--------gWdTrkAFEVFVdANryyWtats
1bqba  ( 227 )    VhtNSGIPNkAAynVIqa----------IgkskSeqIYyrALteyLtsnS
                  aaaa aaaaaaaaaaaa             aaaaaaaaaaaaaa      

                           310       320       330       340 
1npc   ( 281 )    tFsqAragAvqAAadlygansaeVaAVkqSFsAVgVn   
8tlne  ( 280 )    nFsqLraaAvqSAtdlygstsqeVaSVkqAFdAVgVk Vk
1ezm   ( 264 )    nYnsGAçgVirSAqnrny----saadVtrAFstVgVt-çp
1bqba  ( 267 )    nFkdLKdaLyqAAkdlyeq--qTAeqVyeAWneVgVe   
                   aaaaaaaaaaaaaaa     aaaaaaaaaaaa       


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