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Align your sequence(s)

Thiolase/Beta-ketoacyl synthases

class : alpha beta number of structures : 2 average size : 400 average PID : 17 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1afw rasmol 25 A 417 A 3-ketoacyl-COA thiolase Saccharomyces cerevisiae 1.8 20.3
1kas rasmol 2 - 412 - beta-ketoacyl-acp synthase II (KAS II) Escherichia coli 2.4 23.4
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : ketoacyl-synt_C  thiolase_C  thiolase  ketoacyl-synt  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1afwa  (  25 )    knsllekrpedVVIVaANRSAI-GkGfkgaFk------------------
1kas   (   2 )            krrVVVTGLGMLSPVgntvesTWkaLlagqsgIslIdhfdts
                             bbbbbbbb                               

                           60        70        80        90        100 
1afwa  (  56 )    --------------------------dVnTdyLLynFLneFigrFp-epL
1kas   (  44 )    ayaTkFAGlVkdfnCediIsrkeqrkMDaFIqYGIvAGvqAMqdSgLeit
                                               aaaaaaaaaaaaaa       

                           110       120       130       140       150 
1afwa  (  79 )    radlnlIeeVACGNVlN------------------------vgaG--ate
1kas   (  94 )    eenatrI-GAAIGSGiGGlglieeNhtslmnggprkispffvpSTivnmV
                     333   bbbb                                   aa

                           160       170       180       190       200 
1afwa  ( 103 )    HraaClaSgIpysTpFvAlnrqCSSGLtAVndIAnkIkvgqidIGLALGV
1kas   ( 143 )    AghLtimygL--rGpsiSiataCTSGVhNIGhAariIaygdAdVMVAGGA
                  aaaaaaa        bb    333aaaaaaaaaaaaaa     bbbbbbb

                           210       220       230       240       250 
1afwa  ( 153 )    ESmtnnyknvnplgmisseelqknreakkclipmGiTNenVAanfkisrk
1kas   ( 191 )    EkAS-tplgVggfga-----------------------------------
                  b                                                 

                           260       270       280       290       300 
1afwa  ( 203 )    dQDefAAnSYqkAykAkneglFedEIlpIkLpdgsicqsDeGPrpnVtae
1kas   ( 205 )    -----araLStrnd------npqaASRPWDk-------------------
                                                                    

                           310       320       330       340       350 
1afwa  ( 253 )    sLssirpafiGtTTaGNasqvSDGVAGVLLArrsvAnqlnLpvlGRYidF
1kas   ( 225 )    -----------eRd---gFVLGDGAGMLVLEeyehAkkrgakiyAeLvGF
                                         bbbbbbbbbaaaaaa      bbbbbb

                           360       370       380       390       400 
1afwa  ( 306 )    qtvgVp-----peiMGVGPAyAIpkVLeatgLqvqdIdiFEINEAf----
1kas   ( 261 )    GmssdayhmtsppenGaGaalAManAlrdAgieasqIgYVNAhGtStpag
                  bbbb             aaaaaaaaaaaaa   333  bbb         

                           410       420       430       440       450 
1afwa  ( 347 )    AAQAlyCIhkl-gIdlnkVNprGGAIALGHPlGCTGARQVATILrELk--
1kas   ( 311 )    DkAEAqAVktiFgeaasrVlVSSTKSMTGHLLGAAGAVESIYSILALrdq
                  aaaaaaaaaaa             aaaa      aaaaaaaaaaaa    

                           460       470       480       490       500 
1afwa  ( 394 )    ----------------------------kdqIGVVSMCIgtGmGAAAIFI
1kas   ( 361 )    aVPPTinLdnpdegCdLdFVphearqvsgMeyTLCNSfGfggtNGSLIFk
                                                 bbbbbbbb   bbbbbbbb

                    
1afwa  ( 416 )    ke
1kas   ( 411 )    ki
                    


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