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Align your sequence(s)

TATA-box binding protein, C-terminal domain

class : alpha plus beta number of structures : 4 average size : 183 average PID : 61 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1vok rasmol 7 A 198 A TATA-binding protein Arabidopsis thaliana 2.10 19.8
1ytb rasmol 61 A 240 A TATA binding protein saccharomyces cerevisiae 1.80 20.1
1cdw rasmol 155 A 333 A TATA-binding protein Homo sapiens 1.90 18.9
1ais rasmol 1 A 181 A TATA-binding protein Pyrococcus woesei 2.10 21.2
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : TBP  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1voka  (   7 )    egsnpvdlskhpsgivPtLqnIvStVnLdckLdLkaIalqArnAeynpkr
1ytba  (  61 )                sgivPtLqnIvAtVtLgcrLdlktValhArnAeynpkr
1cdwa  ( 155 )                sgivPqLqnIvStVnLgckLdLktIalrArnAeynpkr
1aisa  (   1 )            mvdmskVkLrienIvAsVdLfaqLdLekVldlÇpnSkynpee
                                   bbbbbbbbbb      aaaaaaa   bb     

                           60        70        80        90        100 
1voka  (  57 )    faAViMrIrePkTtAlIfasGkMvCtgAksedfSkmAArkYariVqklgf
1ytba  (  99 )    faAViMrirepkTtAlIfasGkMvVtgAkseddSklASrkYAriIqkigf
1cdwa  ( 193 )    faAViMrirePrTtAlIfssGkMvCtgAkseenSrlAArkYArvVqklgf
1aisa  (  43 )    fpGIiÇhlddPkVaLlIfssGkLvVtgAksvqdIerAVakLaqkLksigv
                     bbbbb    bbbbb    bbbbbbb  aaaaaaaaaaaaaaaaa   

                           110       120       130       140       150 
1voka  ( 107 )    pA-kfkdfkiqnIvGscdVkfpIrLegLayshaafSsyepelfpGLiyrm
1ytba  ( 149 )    aA-kftdfkiqnIvGscdVkfpIrLegLafshgtfSsyepelfpGLiYrm
1cdwa  ( 243 )    pA-kFldFkiqnMvGscdVkfpIrLeGLvlthqqfSsyepelfpGLiYrm
1aisa  (  93 )    kfkrapqidvqnMvFsgdIgrefnLdvvaltLp-nCeyepeqfpGViyrV
                       bbbbbbbbbbbbb      aaaaaaa    bb        bbbb 

                           160       170       180       190 
1voka  ( 156 )    kvpkIvLlIfvsGkIvItgAkmrdeTykAFenIypvLsefrki
1ytba  ( 198 )    vkPkIvLlIfvsGkIvLtgAkqreeIyqAFeaIypvLsefrkm
1cdwa  ( 292 )    ikprIvLlIfvsGkVvLtgAkvraeIyeAFenIypiLkgfrk 
1aisa  ( 142 )    kepkSvIlLfssGkIvCsgAkseadAweAVrkLLreLdk---y
                       bbbb    bbbbbbb  aaaaaaaaaaaaaaaa     


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