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Align your sequence(s)

serine proteinase inhibitor -- serpin-type

class : alpha plus beta number of structures : 8 average size : 376 average PID : 34 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
2ach rasmol 24 A 494 B alpha-1 antichymotrypsin Homo sapiens 2.70 18.1
1qlp rasmol 23 A 394 A alpha-1-antitrypsin Homo sapiens 2.0 23.1
1ath rasmol 46 A 431 A antithrombin III Homo sapiens 3.20 17.9
1att rasmol 46 A 433 A antithrombin III Bos taurus 3.20 21.2
1hle rasmol 23 A 391 B leukeocyte elastase inhibitor Equus caballus 1.95 17.6
1ova rasmol 24 A 391 A ovalbumin Gallus domesticus 2.00 16.9
1a7c rasmol 2 A 379 A plasminogen activator inhibitor-1 Homo sapiens 1.95 18.1
1sek rasmol 11 - 386 - alaserpin Manduca sexta 2.10 19.9
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : SERPIN  
PFAM : serpin  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
2ach   (  24 )          lglAsanVdFAFsLYkqLvlka-pdkNVIFSPLSISTALAFLSL
1qlpa  (  23 )         fnkITpnLaeFAFsLYrqLahqs-nstNIFFSPVsIAtAFAMLSl
1atha  (  46 )       rrVweLSkANsrFATtFYqhLAdskndndnIFLSPLSIStAFAMTKl
1atta  (  46 )      nrrvweLSkANshFATaFYqhLAdsknnndnIFLSPLSISTAFAMTKl
1hle   (  23 )         meqLStANThFAVdLFrALnesd-ptgnIFISPLSISSALAMIfl
1ovaa  (  24 )          gsiGaASMeFCFdVFkeLkvhha-nenIFYCPIAIMSALAMVYL
1a7ca  (   2 )      hhpPsyVAhlaSdFGVrVFqqVAqas-kdrnVVFsPYgVAsvLaMlQL
1sek   (  11 )    getdlqkiLresNdqFtaqMFseVvkan-pgqnVVLSAfSVLpPLGQLAl
                         aaaaaaaaaaaaaaaaaaaa      bbb aaaaaaaaaaaa 

                           60        70        80        90        100 
2ach   (  67 )    GAhntTLteILkGLkFnlt-etseae---------IHqsFqhlLrtlnqs
1qlpa  (  67 )    GTkadThdeILegLnFnlt-eIpeaq---------IheGFqeLlrtlnqp
1atha  (  93 )    GAcndTlqqLmevFkFdtIsektsdq---------IhfFFakLncrLyr 
1atta  (  94 )    GAcnnTltqLmeVFkFdtIsektsdq---------IhfFFakLncrLyrk
1hle   (  67 )    GTrgnTaaqVskaLyFdtVed--------------ihsrFqsLnadInkp
1ovaa  (  67 )    GAkdsTrtqInkvVrFdkLpgFgdsiEaqçGtsvnVHssLrdIlnqItkp
1a7ca  (  49 )    TTggeTqqqIqaaMgfk-----Iddk--------gmapAlrhLykeLmgp
1sek   (  60 )    ASvgeShdeLlraLaLp-----ndnv---------TkdVFadlnrgvr-a
                     aaaaaaaaaa          aaa         aaaaaaaaaaaa   

                           110       120       130       140       150 
2ach   ( 107 )    sd-eLqLsMGNAMFvkeqlslldrFtedAkrlYgSeafaTdFq-dsaaAk
1qlpa  ( 107 )    ds-qLqLttgnGLFLseglklvdkFledVkklYhseAftvnFg-dteeAk
1atha  ( 137 )       sskLvsAnrLFGdksLtFnetYqdiSelvYgAkLqpldFkenaeqSr
1atta  ( 135 )    anksseLvsaNrLFGDksItFnetYqdiSevvYgAklqpldFkgnaeqsr
1hle   ( 107 )    -gapYiLkLaNrLYGEktynFladFlasTqkmYgAelasVdFqqapedAr
1ovaa  ( 107 )    nd-VysFsLASrLYAEerypilpeYlqÇVkeLYrggLepinFqtaadqAr
1a7ca  (  86 )    w-NkDeIsTtDAIFVQrdLkLvqgFmphFfrLFrstVkqVdFs-everAr
1sek   (  95 )    v-kgVdlkmasKIYVakglelnddfaavSrdvFgSeVqnvdFv-ksveAA
                       bbbbbbbbbbb      aaaaaaaaa     bbbb     aaaaa

                           160       170       180       190       200 
2ach   ( 155 )    klIndyVkngTrgkItdLIk--dLdsqTmMVLVNYIFFkAkWempFdpqd
1qlpa  ( 155 )    kqIndyVekgTqgkIvdLVk--eLdrdTvFALVNYIfFkGkWerpFevkd
1atha  ( 184 )    aaInkwVsnkTegrItdVIpseaIneltvLVLVNTIYFkGlWkskFSpen
1atta  ( 185 )    ltInqwIsnkTegrItdVIppqaInefTVLVLVNTIYFkglWkskFspen
1hle   ( 155 )    keInewVkgqTegkIpeLLvkgmVdnmTKLVLVNAIYFkGnWqqkFmkea
1ovaa  ( 155 )    elInswVesqTngiIrnVLqpsSVdsqTAMVLVNAIvFkGlWekaFkded
1a7ca  ( 134 )    fiIndwVkthTkgmisnllgkgaVdqltrlvLvNALyfnGqWktpFpdss
1sek   ( 143 )    gaInkwVedqTnnrIknLVdpdaLdetTrSVLVNAIYFkGsWkdkFnker
                  aaaaaaaaaa                   bbbbbbbbbbb       333

                           210       220       230       240       250 
2ach   ( 203 )    thqsrFylskkkwvmVpMMSlhhLtIpyfrd---eeLsCtVVelkYtg-n
1qlpa  ( 203 )    teeedFhvdqvttvkVpMMkrl-GmFnIqhc---kkLsSwVLLmkYlg-n
1atha  ( 234 )    trkelFykadgesçsAsMMyqe-gkFrYrrV---a-eGTqVLELpFkgdd
1atta  ( 235 )    TrkelFykadgesçsVlMMyqe-skFrYrrv---a-esTqVLeLpFkgdd
1hle   ( 203 )    TrdapFrlnkkdtktvkMMyqk-kkFpYnyi---edLkCrVLeLpYqgke
1ovaa  ( 203 )    TqampFrvteqeskpvqMMyqI-glFrVAsm---asekMkILeLpFAsgt
1a7ca  ( 184 )    thrrlFhksdgstvsvpMMaqt-nkFnyteftTpdghyYdILELpYhGdt
1sek   ( 193 )    tmdrdFhvskdktikvpTMigk-kdVryAdVp---eLdAkMIeMsYegdq
                   bbbbbb     bbbbbbbbbb bbbbbbbb       bbbbbbb     

                           260       270       280       290       300 
2ach   ( 248 )    AsALFILPdq-----dkmeeVeamL-lpetLkrWr--dsLefreIGeLyL
1qlpa  ( 248 )    ATAIFFlPde-----gklqhLEneL-thdiItkfl--enedrrSA-sLhL
1atha  ( 279 )    ITMVLILPkp---ek-slakVEkeL-tpevlqewL--deLeemmL-vVhM
1atta  ( 280 )    ITMVLILPkl---ek-tlakvEqeL-tpdmlqEWl--dEltetlL-VVhM
1hle   ( 248 )    LSMIILLPddIedesTGLekIEkqL-tldkLrewTkpenLylaeV-nVhL
1ovaa  ( 248 )    MSMLVLLPdevs----gleqLesiI-nfekLteWtssnvMeerkI-kVyL
1a7ca  ( 233 )    LSMFIAAPyekev---pLsaLTniL-saqlIshWk--gnMtrlpr-lLVL
1sek   ( 239 )    AsMIIILPnqvd----gitaLeqkLkdpkAlsrAe--erLynteV-eIyL
                  bbbbbbbb         aaaaaa    aaaaaaaa     bbbbb bbbb

                           310       320       330       340       350 
2ach   ( 289 )    PkFsIsrdynLndILlqlgIeeAft-skAdLsgItga--rnLaVsqVvHk
1qlpa  ( 289 )    PklsItgtydLksvLgqlgItkVFs-ngAdLsgVTee--apLkLSkAvHk
1atha  ( 321 )    PrFrIedgfsLkeqLqdmgLvdLFspekSkLpgIvaegrddLyVsdAFHk
1atta  ( 322 )    PrFrIedsfsVkeQLqdmgLedLFspekSrLpgIVaegrsdLyVsdAfHk
1hle   ( 289 )    PrfkLeesydLtshLarlgVqdLfnrgkAdLsGMSga--rdLfVskIIHk
1ovaa  ( 289 )    PrMkMeekynLtsvLmamgItdVFs-ssAnLsgISsa--esLkIsqAvHA
1a7ca  ( 276 )    PkFsletevdlrkpLenlgMtdMFrqfqAdFtsLSdq--eplhvaqalqk
1sek   ( 282 )    PkFkIetttdLkeVLsnMnIkkLFtpgaArLenLLkt-kesLyVdaAiQk
                  b bbbbbbbb aaaaaa    333                     bbbbb

                           360       370       380       390       400 
2ach   ( 336 )    AvLdVfeeGTeASAATAVkItll         trtiVrFnrpFLMIIVPt
1qlpa  ( 336 )    AVLtIdEkGteaagamfleaipm--------sippeVkFnkpFVFLMIEq
1atha  ( 371 )    AFLeVnEEGSeaaastavviagrslnp-----nrvtFkAnrpFLVFIREv
1atta  ( 372 )    AFLeVneeGSeAAASTVISIagrs         rvtFkAnrpFLVLIRev
1hle   ( 336 )    SFVdLnEeGTeAAAATAGTIlla          eenFnAdHPFIFFIrHn
1ovaa  ( 336 )    AHAeIneaGrevvgsaeagvdaas--------vseeFrAdHPFLFCIkHi
1a7ca  ( 324 )    VkieVnesgt                      apeeIiMdRPFLFVVrHn
1sek   ( 331 )    AfIeVnEeGaeaaaana------fkittysfhfvpkveInkPFFFSLkyn
                  bbbbb                              bbb    bbbbbbb 

                           410      
2ach   ( 478 )    dtqNIFFMSKVtnPkqa 
1qlpa  ( 378 )    ntkSPLFMGKVvnPtqk 
1atha  ( 416 )    plnTIIFMGRVAnPçv  
1atta  ( 417 )    alnTIIFMGRVAnPçvd 
1hle   ( 378 )    pSaNILFLGRFSsp    
1ovaa  ( 378 )    atnAVLFFGRCvsp    
1a7ca  ( 366 )    pTGTVLfMGQVmep    
1sek   ( 375 )    --rNsMFSGVCvqp    
                      bbbbbbb       


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