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Align your sequence(s)

Pilin (bacterial filament)

class : alpha plus beta number of structures : 3 average size : 135 average PID : 25 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1hpw rasmol 22 A 150 A fimbrial protein Pseudomonas aeruginosa N/A N/A
2pil rasmol 1 - 158 - fimbrial protein Neisseria gonorrhoeae 2.6 18.7
1dzo rasmol 25 A 144 A fimbrial protein Pseudomonas aeruginosa 1.63 15.3
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : pilin  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1hpwa  (  22 )                       alegtefaraqlseamtlasglktkVsdifs
2pil   (   1 )    ftlielmiviaivgilaavalp-----ayqdytAraqVseAillAegqks
1dzoa  (  25 )                                 gtefarseGasAlasVnplkt
                                                   aaaaaaaaaaaa   aa

                           60        70        80        90        100 
1hpwa  (  53 )    Qd-------gsÇpantaAta------giekDtdingkyvakvtTgg-taa
2pil   (  46 )    aVteyYlnhgkWPen-----NtsAgvapps--dikgkyVkeVeVk-----
1dzoa  (  46 )    tVeeAlsr-gwsVksgtgtedatkkevPLgvaadanklg-tIaLkpdpAd
                  aa                                                

                           110       120       130       140       150 
1hpwa  (  89 )    asGgÇtIvatmkasdvatplrGktltltLgnadkgsytwaçtsnadnk--
2pil   (  85 )    ---nGVVtAtMlssgVnneIkgkkLSLWArren-gsVkwFçGqPVtRtdd
1dzoa  (  94 )    gtadItLtFtMg--gAgpkNkgkiItLtrtaa---dglwkçtS-------
                       bbbbb             bbbbbb         bbbb        

                           160       170       
1hpwa  ( 137 )    ---------------ylpktçqtattttp
2pil   ( 131 )    dtVadakdgkeIdtkHLpstÇrdnfdak 
1dzoa  ( 132 )    ----------dQdeqfipkgÇsr      
                                               


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