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Align your sequence(s)

oligosaccharide phosphorylase

class : alpha beta number of structures : 3 average size : 825 average PID : 45 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1gpb rasmol 19 - 841 - glycogen phosphorylase b (t state) Oryctolagus cuniculus 1.90 19.0
1ygp rasmol 14N A 831 A glycogen phosphorylase Saccharomyces cerevisiae 2.80 17.9
1ahp rasmol 1 A 796 A maltodextrin phosphorylase Escherichia coli 3.00 23.2
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : phosphorylase  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1gpb   (  19 )                                   ag-venVteLkknFnrhlh
1ygpa  (  14N)    trrltGflpqeiksidtmipllsralwnkhqvkkFnkaedFqdrFidhVe
1ahpa  (   1 )                                   sqPiFndkqFqeALsrQwq
                                                       aaaaaaaaaaaaa

                           60        70        80        90        100 
1gpb   (  37 )    ftlvk-drnvAtprdyYfALAhTVrdhLvgrwirTqqhyyekdpkrIYYL
1ygpa  (  37 )    ttlar-slynCddmvAYeAASmSIrdnlvidWnkTQqkFttrdpkrVYYL
1ahpa  (  20 )    -ryglnsAaeMtprqwWlAVSeALAeMlraqpfakpva----nqrhVNYI
                              aaaaaaaaaaaaaaaaa                bbbbb

                           110       120       130       140       150 
1gpb   (  86 )    SLEFYmGrtLqnTMVNLa--lenaCdeATyqlgldMeeLeeieedagLGN
1ygpa  (  86 )    SLEFlmGraLdnALINmki premIkgALdelgfkLedVldqEpdagLGn
1ahpa  (  65 )    SMEFlIGrlTgnNLlNLg--WyqdVqdsLkaydinLtdLleeEidPaLGA
                           aaaaaa      aaaaaaaaa     aaaaa          

                           160       170       180       190       200 
1gpb   ( 134 )    GglGRLAACFLdSMATlgLAAYGYGIrYefGIfnQkicggwQmeeaddwl
1ygpa  ( 134 )    gglGRLAACFvdSMATeGIPAWGYGLrYeyGifaQkiidgyQvetpdyWl
1ahpa  ( 113 )    GGLGRLAACFLdSMATvgQsAtGYGLNYqyGlFrQsfvdgkQveapddWh
                   aaaaaaaaaaaaaaa    bbbbbb       bbbbb  bbbbb     

                           210       220       230       240       250 
1gpb   ( 184 )    rygnpWekarpeftLpVhFygrVehts---qgAkWvdTqvVlAmPyDtPv
1ygpa  ( 184 )    nsgnpWeiernevqIpVtFygyvdrpt tlsaSqWiGgerVlAVAYDfPV
1ahpa  ( 163 )    rsnYPWFrhnealdvqVgIggaVtk------dgrWepeftItGqAwDLpv
                         bb     bbbbb  bb           bb  bbbbbbbbbbbb

                           260       270       280       290       300 
1gpb   ( 231 )    pGyrNnVVNtMrLWsAkAp-----ndfnlkdfnvggyiqavldrnlaenI
1ygpa  ( 231 )    pGFktsNVNNLRLWqArPttefdlnkfn-----ngdyknSvaqqqrAesI
1ahpa  ( 207 )    VGYrnGVaqpLrLWqAthahpfdltkfn-----dgdflrAeqqGinAekL
                  b      bbbbbbbbbb                   aaaa a aaaaa  

                           310       320       330       340       350 
1gpb   ( 276 )    SrvLypndnffegkelrLkQEYFVVAATLqDIirrFksskfgcrdpvrtn
1ygpa  ( 276 )    TavLypndnfaqgkelrLkQqYFWCaASLhDIlrRfkkskr--------p
1ahpa  ( 252 )    TkvLYpndnhtaGkklrLmQQYFQCaCSVadIlrrHhlagr--------e
                                aaaaaaaaaaaaaaaaaaaaaaaa            

                           360       370       380       390       400 
1gpb   ( 326 )    FdaFpdkVaIQLNdThPSLAIPELMrvLvdlerldwdkAweVTvkTCAYT
1ygpa  ( 326 )    wteFpdqVaIQLNdthPTLAIVELQrvLVDlekldWheAwdIVtkTFAYT
1ahpa  ( 294 )    lheLAdyEVIQLNDTHPTIAIPELLrvLiDehqmswddAwaITskTFAYT
                     aaaabbbbbb      aaaaaaaaaaa     aaaaaaaaaaabbbb

                           410       420       430       440       450 
1gpb   ( 376 )    NhTvIpeAlErWpvhlLetLLprHLqIIyeInqrFlnrVaaafpgdvdrl
1ygpa  ( 376 )    NhtvmqealekWprrlFghLLpRHleIIydInwfFledVakkfpkdvdLl
1ahpa  ( 344 )    NHTlmpeAlerWdvklVkgLLprHMqIIneIntrFktlVektwpgdekvw
                       333  bbbaaaaaaa aaaaaaaaaaaaaaaaaaaaa       a

                           460       470       480       490       500 
1gpb   ( 426 )    rrMsLveeg-avkrInMAhLCIAGShAVNGVAriHSeiLkktiFkdFyel
1ygpa  ( 426 )    srIsIIeensperqIrMAfLAIVGShkVNGVvelHSelIkttiFkdFikf
1ahpa  ( 394 )    akLAVvhd----kqVHManLCVvGGfAVNGVAalHsdlVvkdlFpeYhql
                  aaa          bbbaaaaaaa    bbb  aaaaaaaaa   aaaaaa

                           510       520       530       540       550 
1gpb   ( 475 )    E-phKFqnKTNGITPRrWLvLCNpgLaeiIaerig---eeYIsdLdqLrk
1ygpa  ( 475 )    ygpskFvnVTNGITPRrWLkQANpsLAklIsetLndpteeYLldMakLtq
1ahpa  ( 440 )    w-pnkFhnVTNGITPRRWIkqCNpaLaaLLdksLqk---eWAndLdqLin
                       bbb               aaaaaaaaaa           333333

                           560       570       580       590       600 
1gpb   ( 521 )    LlsyvddeaFIrdvakvkqenKlkFaaYLerey--kVhInp----nSLFD
1ygpa  ( 521 )    LekyvedkeflkkWnqvklnNKirLVdlIkkendgvdiInreyLddTLFD
1ahpa  ( 486 )    LvklAddakFrdlYrvikqaNKvrLaefVkvrt--gidInp----qAIFD
                          aaaaaaaaaaaaaaaaaaaaaaa                bbb

                           610       620       630       640       650 
1gpb   ( 565 )    VQVKRIheYKRQLLNCLHVITlYnrikkepn---------kfvVpRTVMI
1ygpa  ( 565 )    MQVkrIheyKRQQLNVFGIIyrYlaMknmlkngasieeVarkyprkVSIF
1ahpa  ( 530 )    IQIKRLheYKRQHLNLLRILALYkeirenp---------qadrvpRVFLF
                  bbb        aaaaaaaaaaaaaaaaa                 bbbbb

                           660       670       680       690       700 
1gpb   ( 606 )    GGKAApgyhmAkMIIkLItaIgdvVnhdpvVgdrLrViFlenYrVSLAek
1ygpa  ( 606 )    GGkSapgyymAkLIIkLIncVadiVnndesIehLLkVvFVadYnVskAei
1ahpa  ( 571 )    GAkAapgyylAknIIfAInkVadvInndplVgdkLkVVFLpdYcVsAAek
                  b       aaaaaaaaaaaaaaaaa           bbbb    aaaaaa

                           710       720       730       740       750 
1gpb   ( 656 )    VIPAADLSEQIsTAgteaSgTGNMKFMLNgALTIGTmDGAnvEMAeeAge
1ygpa  ( 656 )    IIPASDLSEHISTAgteaSgTSnMKFVMNGGLIIGTvdGANvEItreIge
1ahpa  ( 621 )    LIPAADISEQISTAgkEASGTgNMKLALNGALTVGTldGANveIaekVge
                  a     bbbb           aaaaaa    bbbb     aaaaaaaa 3

                           760       770       780       790       800 
1gpb   ( 706 )    enFfIFGmrvedvdrldqrgynAqeyydripeLrqIIeqLssgfF-Spkq
1ygpa  ( 706 )    dNVflfGnlsenveelrynh--qyhpqdlpssLdsVLsyIe--qf spen
1ahpa  ( 671 )    enIfifGhtvkqVkailakgYdPvkwrkkdkvLdaVLkeLesGkY-Sdgd
                  33 bb    aaaaaaaaa     a      aaaaaaaaa           

                           810       820       830       840       850 
1gpb   ( 755 )    pdlFkdIvnmLmhh--DrFKVFADYeeYVkCQerVsalyk-npreWtrmv
1ygpa  ( 755 )    pneFkpLVdsIkyh-gDyyLVsdDFesYlathelVdqeFHnqrseWlkkS
1ahpa  ( 720 )    khaFdqMlhsIgkqggDpyLVMADFaaYveAQkqVDvlyr-dqeawTrAA
                      aaaaaaa             aaaaaaaaaaaaaaa   aaaaaaaa

                           860       870       880       890 
1gpb   ( 802 )    IrNIATSgkFSSdrTIaqYAreIWgvepsrqrlpApdeki
1ygpa  ( 802 )    VlSLAnVgfFSSdrCIeeYSdtIWnVepvt          
1ahpa  ( 769 )    IlNTArCgmFSSdrSIrdYqarIWqaar            
                  aaaaa  333 aaaaaaaaaaa                  


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