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Align your sequence(s)

pentraxin (pentaxin)

class : all beta number of structures : 2 average size : 205 average PID : 52 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1b09 rasmol 1 A 206 A C-reactive protein Homo sapiens 2.50 19.60
1sac rasmol 1 A 204 A serum amyloid P component Homo sapiens 2.00 17.90
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : PTX  
PFAM : pentaxin  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1b09a  (   1 )    qtdMsrkAFvFpkesdtsyVsLkapltkpLkaFTVÇLhFyTelsstrgYS
1saca  (   1 )    htdLsgkVFvFpresvtDhVnLiTpLekpLqnFTLÇFRAySdls--raYS
                        bbbbb       bbbb         bbbbbbbbb        bb

                           60        70        80        90        100 
1b09a  (  51 )    IFSYAtkrqdnEILIfWskdiGySFTVGgseilFevpevtvapvHTSW
1saca  (  49 )    LFSYNTqgrdnELLVykervgeYSLyIGrhkvtSkviekfpapvHIÇVSW
                  bbbbb       bbbbbb   bbbbbb  bbbbbb        bbbbbbb

                           110       120       130       140       150 
1b09a  ( 101 )    esasGiVeFwvdGkprvrkslkkgytVgaeAsIILGQEQdsfggnfegsq
1saca  (  99 )    eSssGiAeFwIngtpLvkkglrqgyfVeaqPkIVLGQEQdsyggkfdrsq
                  b    bbbbbb  bb   bb           bbbb            333

                           160       170       180       190       200 
1b09a  ( 151 )    SLvgdIGnVnMWdfvLspdeIntiylggpfsPnVLnWraLkyevqgeVft
1saca  ( 149 )    SFvgeIGdLYMWdsvLppenIlsAyqgtplpAnILdWqaLnyeirgyVii
                     bbbbbbbbb     aaaaaaaa                bbbb   bb

                        
1b09a  ( 201 )    kpQlWp
1saca  ( 199 )    kplvwv
                  bb    


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