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Align your sequence(s)

Lyase

class : all alpha number of structures : 5 average size : 444 average PID : 31 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1jsw rasmol 1 A 459 A aspartate ammonia-lyase Escherichia coli 2.8 21.6
1fur rasmol 4 A 459 A fumarate hydratase class II Escherichia coli 1.95 17
1dcn rasmol 33 A 465 A delta crystallin II (argininosuccinate lyase) Anas platyrhynchos 2.30 22.9
1aos rasmol 20 A 462 A argininosuccinate lyase Homo sapiens 4.2 18.79
1yfm rasmol 27 - 485 - fumarate hydratase, mitochondrial Saccharomyces cerevisiae 2.6 19.6
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : lyase_1  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1jswa  (   1 )    msnniriEedllgtreVpadAyyGvhTlrAienfyis--nnkisdipeFV
1fura  (   4 )        vrsEkdsmgaidVpadkLWGAqTqrSlehfris--tekM-pts-Li
1dcna  (  33 )                                                dqr-lS
1aosa  (  20 )                    imekfnaSia-----------------yDrh-Lw
1yfm   (  27 )       sfrtetdafgeihVpadkyWGAqTqrsfqnfkiggarerM-plp-LV
                                                                  aa

                           60        70        80        90        100 
1jswa  (  49 )    rGMVmVKkAAAmANkelqtIpksvAnaIiaACdeVlnnGkcmdqFpVDvy
1fura  (  46 )    hALAlTKrAAAkVNedlglLseekAsAIrqAAdeVl-agqhddEFpLAIw
1dcna  (  38 )    evDIqgsmAYAkALekagiLtktelakIlsgLekIseewskgvfvvk---
1aosa  (  36 )    evDvqgskAySrGLekaglLtkaeMdqIlhGLdkvk---------ln---
1yfm   (  72 )    hAFGvLKkSAAiVNeslggLdpkiSkaIqqAAdeVa-sgklddhFpLvVf
                  aaaaaaaaaaaaaaaa     aaaaaaaaaaaaaa               

                           110       120       130       140       150 
1jswa  (  99 )    QggaGtSVNmNTNeVLANIGLelmghqkgeyqyLnpndhVnkcQstnDAY
1fura  (  95 )    QtgsGtqSNMNMNEVLANrASellggvrGmeRkVhPnddVnksQssnDVF
1dcna  (  85 )    --gsdedihtanerrLkelig-------------diAgkLntgRsrNDqv
1aosa  (  83 )    --snDediHtanerrLkelIg-------------atAgkLhtgrsrnDqv
1yfm   ( 121 )    QtgsGtqSNmNANEVISnrAiei----------vhpnnhCnqsQssnDTF
                         aaaaaaaaaaaa                          aaaaa

                           160       170       180       190       200 
1jswa  ( 149 )    PTGFRIAVysSLi-kLvdAInqLreGFerKavefqdilKMgr-tqlqdav
1fura  ( 145 )    PTAMhVAALlALrkqLipqLktLtqTLneksraFadivKIgrt-nlqdat
1dcna  ( 120 )    VTDLKlfMknsLs-iIsthLlqLIktLVerAaieidviLPgyt-nlqkaq
1aosa  ( 118 )    VTDLRLwMrqtCs-tLSglLweLIrtMVdrAeaerdvlFPgyt-hlqraq
1yfm   ( 170 )    PTVMhIAASlqIqneLipeLtnLknaLeakskeFdhivKIgrt-hlqdat
                  aaaaaaaaaaaaa  aaaaaaaaaaaaaaaaaa    bbbbb     bbb

                           210       220       230       240       250 
1jswa  ( 197 )    pmtLGqeFraFSilLkeEVknIqrtAelLLeVnLGaTaigtGlntpkeYs
1fura  ( 194 )    PltLGqeIsgWVamLehnlkhIeyslphVaeLALGGtavGtglnthpeYa
1dcna  ( 168 )    PiRWSqfLLsHAvaLTrDSerLgeVkkrInvLPLGSGalagNpl--dIdr
1aosa  ( 166 )    PiRWShwILshAvaLtrDSerLleVrkrInvLPLGSgaiagNpl--gVdr
1yfm   ( 219 )    PltLGqeFsgYvqqVenGiqrVahSlktLsfLAQGGtavGtglnTkpgFd
                  bbbaaaaaaaaaaaaaaaaaaaaaaaaaa bb                 a

                           260       270       280       290       300 
1jswa  ( 247 )    plAVkkLaeVTgfpCvpaedlieaTsdcgaYvmVHgALkrLAvkMskICn
1fura  ( 244 )    rrVAdeLavitcApFvtApnkfeaLatCdALvqAHgaLkgLAasLmkIAn
1dcna  ( 216 )    emLrseL----eFa-sislnsmdAIseRdFVveFLsFAtlLMihLskMAe
1aosa  ( 214 )    elLraeL----nFg-aitlnsmdATseRdFVaeFLfWrslCMthLsrMAe
1yfm   ( 269 )    vkIAeqIskeTglkFqtApnrfeaLaaHdaIveCSgaLntLAcsLfkIAq
                  aaaaaaa        bb   aaaaaa  aaaaaaaaaaaaaaaaaaaaaa

                           310       320       330       340       350 
1jswa  ( 297 )    dLrlLssgpraglnEInLpe-lqagssimpakvnpvvPevVnqvCfkVig
1fura  ( 294 )    dVrwlAsGprcgigEIsIpe-nepgssimpgkvnptqCeaLtmlCcqVmg
1dcna  ( 261 )    dLiiYsts---efgFLtLsdafst---------npdSLelIrsksgrVfg
1aosa  ( 259 )    dLilYCtk---efsFVqLsdayStgsslmpqkknpdsLelIrskagrVfg
1yfm   ( 319 )    dIrylGsGprcgyhELmLpe-nepgssimpgkvnptqNeaLtqvCvqVmg
                  aaaaa          bb                  aaaaaaaaaaaaaaa

                           360       370       380       390       400 
1jswa  ( 346 )    ndttVtmAaeagqlqlNvmEPvIgqAMFeSVhiLtnACynLLekCIngIt
1fura  ( 343 )    NdvaInmGGasgnfelNvfRPmVIhnFLqSVrlLAdgMesFnkhCAvgIe
1dcna  ( 308 )    rlasIlmvlkglpsTynkdLqeDkeAVfdVvdtLtavLqvAtg-VIstLq
1aosa  ( 306 )    rcagLlmtlkglpsTynkdLqeDKeAVfeVSdtMsaVLqvAtg-VIstLq
1yfm   ( 368 )    nnaaItfaGsqgqfelNvfKPvMIanLLnSIrlItdaAysFrvhCVegIk
                  aaaaaaaaaa            aaaaaaaaaaaaaaaaaaaaa      b

                           410       420       430       440       450 
1jswa  ( 396 )    AnkevCegyVynsigivtyLnpfIg---------hhnGdiVgkiCaetgk
1fura  ( 393 )    PnrerInqlLneslmlvtaLnthig---------ydkAaeIakkAhkegl
1dcna  ( 357 )    IskenMekaLt-peMLatdLAlyLvrkgvpfrqAhtaSgkAvhlAetkgi
1aosa  ( 355 )    IhqenMgqALs-pdMLatDLAyyLvrkgmpfrqAheAsgkAvfmaetkgv
1yfm   ( 418 )    AneprIhelltkslmlvtaLnpkig---------ydaaskVaknAhkkgi
                  b aaaaaa            a             aaaaaaaaaaaa    

                           460       470       480       490       500 
1jswa  ( 437 )    sVreVVler-----gllteaeLddifsv                      
1fura  ( 434 )    tLkaAAlal-----gylseaeFdswvrpeqm                   
1dcna  ( 406 )    tInnLsledLksIspqFs-sdVsqvfnfvnSVeqytalggtAksSVttqi
1aosa  ( 404 )    alnqLslqeLqtisplFs-gdVicVwdyrhSVeqygalggtArsSVdwqI
1yfm   ( 459 )    tLkeSAlel-----gvltekefdewvvpehml                  
                        aa                                          

                           510 
1jswa                        
1fura                        
1dcna  ( 455 )    eqlrelmkkqk
1aosa  ( 453 )    rqVrallqaq 
1yfm                         
                             


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