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Align your sequence(s)

Leukocidin (pore-forming toxin)

class : membrane bound all beta number of structures : 3 average size : 294 average PID : 43 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1pvl rasmol 1 - 301 - panton-valentine leucocidin F component Staphylococcus aureus 2.0 20.126
3lkf rasmol 1 A 299 A leukocidin F Staphylococcus aureus 1.90 19.9
7ahl rasmol 1 A 293 A alpha-hemolysin Staphylococcus aureus 1.9 19.9
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Aerolysin  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1pvl   (   1 )                 aqhitpvsekkVddkItlykTtAtSdsdkLkIsQiLt
3lkfa  (   1 )                 egkitpvsvkkvddkVtlykTtAtAdSdkFkIsQiLt
7ahla  (   1 )    adsdiniktgttdigs-----------nttvktgdlvtydkengMhKkVf
                                                 bbbbbbbbb    bbbbbb

                           60        70        80        90        100 
1pvl   (  38 )    FNFIkDksydkdTLILkAagnIySgytkpnpkdtisSqFYWGSkYnIsIn
3lkfa  (  38 )    FNFIkDksydkdTLVLkAtgnInSgfvkpnpndydfSkLyWGAkYnVsIs
7ahla  (  40 )    ysFidDknhnkklLvIrTkgtIaGqYrvyseegankSGLAWPSaFkVqLq
                  bbbb       bbbbbbbbbbb             bbbbbbbbbbbbbbb

                           110       120       130       140       150 
1pvl   (  88 )    SdsndsVnVvdyAPknqneefqVqqTVgYsygGdinisn-----------
3lkfa  (  88 )    SqsndsVnVvdyAPknqneefqVqntLgYtfgGdisIsn-----------
7ahla  (  90 )    LpdnEvAqIsdyyprns------idtkeymstltygfngnvtgddtgkig
                         bbbbbb              bbb   bbbbbb           

                           160       170       180       190       200 
1pvl   ( 127 )    glsgggksfsetInYkQesYrTslDkrtnfkkIGWdVeAhkImNngwGpy
3lkfa  ( 127 )    gl----tAfsetInYkQesYrTtlsrntnyknVGWgVeAhkImnngwGpy
7ahla  ( 134 )    gliganvsightlkyvqpdFktiles-ptdkkVGWkViFnnMvNqnwgpy
                           bbbbb     bbbbb       bbbbbbbb           

                           210       220       230       240       250 
1pvl   ( 180 )    gRdsyhstygNEMFLgsrqsnlnAGqNFLeyhkMpvLSrgnFnPeFIGVL
3lkfa  ( 180 )    gRdsfhptyGNeLFLagrqssayAGqNFIaqhqMplLSrsnFnPeFLSVL
7ahla  ( 183 )    drdswnpvyGNqLFMktrngsmkAadNFLdpnkAsslLssGfsPdFaTvI
                                         333    333  aaaa      bbbbb

                           260       270       280       290       300 
1pvl   ( 230 )    sRkqna-akkSkItVtYqReMDrYtNfwnqlhWiGnNykdeNrAtHtSiY
3lkfa  ( 230 )    sHrqdg-akkSkITVtYqreMDLYqIrwngfyWaGaNyknfktrtFkStY
7ahla  ( 233 )    tMdrkaskqqTnIdVIYeRvrDDYqLhwtstnWkGtNtkdkwtdrsserY
                  bb       bbbbbbbbbbbbbbbbbbb    bbbbbbbbbbbbbbbbbb

                           310       320 
1pvl   ( 279 )    eVdWenhtVklidtqskeknpms
3lkfa  ( 279 )    eIdWenhkVklldtketennk  
7ahla  ( 283 )    kIdWekeeMtn            
                  bbb    bbb             


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