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Align your sequence(s)

immunoglobulin domain -- V set - immunoglobulin heavy chain

class : all beta number of structures : 21 average size : 123 average PID : 52 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
6fab rasmol 1 H 126 H immunoglobulin FAB 36-71 Mus musculus 1.90 20.90
1fai rasmol 1 H 129 H immunoglobulin FAB R19.9 Mus musculus 2.70 18.90
1jhl rasmol 1 H 116 H immunoglobulin DAB D11.15 Mus musculus 2.40 21.40
3hfl rasmol 2 H 113 H immunoglobulin FAB HyHEL-5 Mus musculus 2.65 19.60
1bbd rasmol 1 H 123 H immunoglobulin FAB 8F5 Mus musculus 2.80 19.00
1nca rasmol 1 H 118 H immunoglobulin FAB NC41 Mus musculus 2.50 19.10
1mam rasmol 1 H 124 H immunoglobulin FAB YS-T9.1 Mus musculus 2.50 21.50
1mcp rasmol 1 H 127 H immunoglobulin FAB McPC603 Mus musculus 2.70 22.50
4fab rasmol 1 H 123 H immunoglobulin FAB 4-4-20 Mus musculus 2.70 21.50
8fab rasmol 1 B 126 B immunoglobulin FAB HIL Homo sapiens 1.80 17.30
2fb4 rasmol 1 H 118 H immunoglobulin FAB KOL Homo sapiens 1.90 18.90
1dfb rasmol 1 H 131 H immunoglobulin FAB 3D6 Homo sapiens 2.70 17.70
1igm rasmol 1 H 129 H immunoglobulin FAB POT Homo sapiens 2.30 20.10
1hil rasmol 1 B 118 B immunoglobulin FAB 17/9 Mus musculus 2.00 19.00
1igf rasmol 1 H 118 H immunoglobulin FAB B13I2 Mus musculus 2.80 18.10
2fbj rasmol 1 H 123 H immunoglobulin FAB J539 Mus musculus 2.00 19.40
3hfm rasmol 1 H 118 H immunoglobulin FAB HyHEL-10 Homo sapiens 3.00 24.60
1baf rasmol 1 H 120 H immunoglobulin FAB AN02 Mus musculus 2.90 19.50
1fdl rasmol 1 H 121 H immunoglobulin FAB D1.3 Mus musculus 2.50 18.40
7fab rasmol 1 H 122 H immunoglobulin FAB NEW Homo sapiens 2.00 16.90
1bvk rasmol 1 B 116 B immunoglobulin FAB HULYS11 (engineered) Homo sapiens and Mus musculus 2.7 20.8
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : IGv  
PFAM : ig  
other info key to JOY annotation | show related PDB structures

                            10        20        30        40        50  
6fabhv  (   1 )    evqLqQsgvelvragssVkMsÇkAsgytFts-nGINWVkqrpgqglewIG
1faihv  (   1 )    qvqLqQsgaelvragssvkMsÇkAsgytFts-yGVNWVkqrpgqglewIG
1jhlhv  (   1 )    qvqLqQsgaelvrpgasvkLsÇkAsgytFis-ywINWVKqrpgqglewIG
3hflhv  (   2 )     vqlqQsgaelmkpgasVkIsÇkAsgytfsd-ywIeWvkqrpghglewIG
1bbdhv  (   1 )    evqLqQsgaelvrpgasvkLsÇtTsgFnIkd-IyIhWvkqrpeqglewIG
1ncahv  (   1 )    qiqLvQsgpelkkpgetVkIsÇkAsgytFtn-yGMNWVkqapgkglewMG
1mamhv  (   1 )    evkLvEsggglvqpggslrLsÇaTsgftFtd-yyMSWvRqppgkalewLG
1mcphv  (   1 )    evkLvEsgGglvqpggslrLsÇaTsgftFsd-fyMEWVRqppgkrlewIA
4fabhv  (   1 )    evkLdEtgGglvqpgrpmkLsÇvAsgftFsd-ywMnWvrqspekglewVA
8fabhv  (   1 )    avkLvQagggvVqpgrslrLsÇiAsgftFsn-yGMHWVrqapgkglewVA
2fb4hv  (   1 )    evqLvQsgGgvvqpgrslrLsÇsSsgfiFss-yAMyWVRqapgkglewVA
1dfbhv  (   1 )    evqLvEsgGglvqpgrslrLsÇaAsgftFnd-yaMhWVRqapgkglewVS
1igmhv  (   1 )    evhLlEsgGnlvqpggslrLsÇaAsgftFni-fVMSWVRqapgkglewVS
1hilhv  (   1 )    evqLvEsgGdlvkpggslkLsÇaAsgfsFss-ygMSWVRqtpdkrlewVA
1igfhv  (   1 )    evqLvEsgGdlvkpggslkLsÇaAsgftFsr-caMSWVRqtpekrlewVA
2fbjhv  (   1 )    evkLlEsgGglvqpggslkLsÇaAsgfdFsk-ywMSWVrqapgkglewIG
3hfmhv  (   1 )    dvqLqEsgpslvkpsqtLsLtÇsVtgdsItsd-yWSWIRkfpgnrleyMg
1bafhv  (   1 )    dvqLqEsgpglvkpsqsQsLtÇtVtgysItsdyaWNWIRqfpgnklewMG
1fdlhv  (   1 )    qvqLkEsGpglvapsqsLsItÇtVsgfsLtg-yGVNWVRqppgkglewLG
7fabhv  (   1 )    avqLeQsgpglVrpsqtLsLtÇtVsgtsFdd-yyWTWVrqppgrglewIG
1bvkb   (   1 )    qvqLqEsgpglvrpsqtLsLtÇtVsGfsLtg-ygVNWVRqppgrglewIG
                     bbbb    bb     bbbbbbbb   333   bbbbbb      bbbb

                            60        70        80        90        100 
6fabhv  (  50 )    yNnPg--ngyiaynekFkgkTtLtvdksssTAyMqLrsLtseDsAvYfÇA
1faihv  (  50 )    YinPg--kgylsynekFkgkTtLtVdrssstAyMqLrsLtsedaAvYfÇA
1jhlhv  (  50 )    nIyPs--dsytnynqkfkdkAtLtVdkssstAyMqLssPtsedsavYyÇT
3hflhv  (  50 )    eIlPg--sgstnyherfkgkAtFtAdtsssTAyMqLnsLtsedsgvYyÇl
1bbdhv  (  50 )    rLdPa--ngytkydpkfqgkAtItvdtssntAyLhLssLtsedtAvYyÇd
1ncahv  (  50 )    WInTn--tgeptygeeFkgrFaFsletsasTANLqInnLkneDkAtFfÇA
1mamhv  (  50 )    fIrnkadgytteysasVkgrFtIsRdnsqsiLyLqMntLraeDsAtYyÇT
1mcphv  (  50 )    aSrnkgnkytteysasVkgrFiVsRdtsqsiLyLqMnaLraeDtAiYyÇA
4fabhv  (  50 )    qIrNkpynyetyysdsVkgrFtIsRddskSsVyLqMnnLrvedmGiYyÇT
8fabhv  (  50 )    VIwy--ngsrtyygdsVkgrFtIsRdnskrtLyMqMnsLrteDtAvYyÇA
2fb4hv  (  50 )    iIwd--dgsdqhyadsVkgrFtIsRndskntLfLqMdsLrpeDtGvYfÇA
1dfbhv  (  50 )    GIsw--dsssigyadsVkgrFtIsRdnaknsLyLqMnsLraeDmAlYyÇV
1igmhv  (  50 )    GVfg--sggntdyadaVkgrFtItrdnskntLyLqMnsLraeDtAiYyÇA
1hilhv  (  50 )    tIsn--gggytyypdsVkgrFtIsRdnakntLyLqMssLkseDsAmYyÇA
1igfhv  (  50 )    GIss--ggsytfypdtVkgrFiIsRnnarntLsLqMssLrseDtAiYT
2fbjhv  (  50 )    eIhp--dsgtinytpslkdkFiIsRdnaknsLyLqMskVrseDtAlYyÇA
3hfmhv  (  50 )    yVsys---gstyynpsLksrIsItrdtsknqYyLdLnsVtteDtAtYyÇA
1bafhv  (  51 )    yMsys---gstrynpslrsrIsItrdtsknqFfLqLksVtteDtAtYfÇA
1fdlhv  (  50 )    mIwgd---gntdynsalksrLsIskdnsksqVfLkMnsLhtdDtArYyÇA
7fabhv  (  50 )    yVfyt---gttlldpsLrgrVtMlvntsknqFsLrLssVtaaDtAvYyÇA
1bvkb   (  50 )    mIwgd---gntdynsalksrVtMlkdtsknqFsLrLssVtaaDtAvYyÇA
                   bb        bbb       bbbbbb    bbbbbb    333 bbbbbb

                            110       120       130     
6fabhv  (  98 )    rSeyyg---g--sykfdywGqGTtLtVssaktt---p
1faihv  (  98 )    rSfyggsdla--vyyfdswGqGTtLtVssaktt---p
1jhlhv  (  98 )    rddny--------gamdywGqGTtVtv          
3hflhv  (  94 )    Hgny----------dfdgwGqGTtLtVss        
1bbdhv  (  98 )    Gyys--------yydmdywGpGTsVtVssaktt---a
1ncahv  (  94 )    rGednfGs------lsdywGqGTtLtVssaktt---a
1mamhv  ( 100 )    rdpygp---------aaywGqGtlVtVsaakttp   
1mcphv  ( 100 )    Rnyygst------wyfdvwGaGttVtVssesarn   
4fabhv  ( 100 )    Gsyy----------gmdywGqGtsVtVssaktta   
8fabhv  (  98 )    rDpdi-----lTafsfdywGqGvlVtVssastkg   
2fb4hv  (  98 )    rDGghGssasçfgpdywGqGtpVtVss        
1dfbhv  (  98 )    kGrDyydsggyftvafdiwGqGtmVtVssastk---g
1igmhv  (  98 )    KHrvs-----yvltgfdswGqGtlVtVssgsasaptl
1hilhv  (  94 )    Rrery------dengfaywgqGtlVtVsaaktta   
1igfhv  (  94 )    ryss-------dpfyfdywGqGttLtVssakttp   
2fbjhv  (  98 )    RLhy--------ygynaywGqGtlVtVsaesar---n
3hfmhv  (  97 )    n-w-----------dgdywgqGtlVtVsaakttp   
1bafhv  (  98 )    rGw-----------playwGqGtqVsVseakttp   
1fdlhv  (  97 )    Rerd---------yrldywGqGttLtVssasttp   
7fabhv  (  97 )    rnlia--------ggidvwGqGslVtVssastkg   
1bvkb   (  97 )    rerd---------yrldywGqGslVtVss        
                   bb               bb   bbbbb          


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