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Align your sequence(s)

immunoglobulin domain -- C1 set - constant immunoglobulin

class : all beta number of structures : 12 average size : 98 average PID : 33 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1pfc rasmol 346 - 446 - immunoglobulin FC CH2 Cavia porcellus 3.10 30.30
1fc1 rasmol 238 A 341 A immunoglobulin FC CH2 Homo sapiens 2.90 22.00
1fc1 rasmol 346 A 443 A immunoglobulin FC CH3 Homo sapiens 2.90 22.00
1mam rasmol 125 H 217 H immunoglobulin FAB YS-T9.1 Mus musculus 2.50 21.50
4fab rasmol 124 H 216 H immunoglobulin FAB 4-4-20 Mus musculus 2.70 21.50
3hfl rasmol 119 H 223 H immunoglobulin FAB HyHEL-5 CH1 Mus musculus 2.65 19.60
2fb4 rasmol 124 H 221 H immunoglobulin FAB KOL CH1 Homo sapiens 1.90 18.90
1dfb rasmol 111 L 212 L immunoglobulin FAB 3D6 CL1 Homo sapiens 2.70 17.70
2fbj rasmol 112 L 213 L immunoglobulin FAB J539 CL1 Mus musculus 2.00 19.40
2fb4 rasmol 115 L 214 L immunoglobulin FAB KOL CL1 Homo sapiens 1.90 18.90
2fbj rasmol 124 H 220 H immunoglobulin FAB J539 CH1 Mus musculus 2.00 19.40
1cqk rasmol 4 A 104 A MAK33 antibody CH3 Mus musculus 2.2 19.6
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : IGc1  
PFAM : ig  
other info key to JOY annotation | show related PDB structures

                             10        20        30        40        50  
1pfc     ( 346 )       pevyllppprnelskk--kvslTÇmitgfy-pa-dInVewds---se
1fc1ac1  ( 238 )       psVfLfpPkpkdTlmisrtPeVtÇvVvdVshedpqVkFnWyvdg-vq
1fc1ac2  ( 346 )       PqVyTlpPsreemtkn--qVsLtÇlVkgFy-ps-dIaVeWesng-qp
1mamhc   ( 125 )       PsVyplapgcgdttgs--sVtLgÇlVkgYf-pe-sVtVtW--nsg-s
4fabhc   ( 124 )       psVyplapvcgdttgs--sVtlgÇlVkgYf-pe-pVtLtw--nsG-s
3hflhc   ( 119 )       PsVyplapgsaaqtns--mvtLgÇlVkgYf-pe-pVtVtW--nsg-s
2fb4hc   ( 124 )       PsVfplaPsskstsgg--taaLGÇlVkdYf-pq-pVtVsW--nsg-a
1dfblc   ( 111 )       PsVfifpPsdeqlksg--tAsVvÇlLnnFy-pr-eAkVqWkVdnalq
2fbjlc   ( 112 )       PtVsifpPsseqltsg--gAsVvÇfLnnFy-pk-dInVkWkIdg-se
2fb4lc   ( 115 )       ptVtLfpPsseelqan--kAtLvÇlIsdFy-pG-aVtVaWkadg-sp
2fbjhc   ( 124 )       ptIypltlppalss-d--pviIGÇlIhdYf-psgtMnVtW--gks-g
1cqka    (   4 )    paaPqVytipPpleqmakd--lVsLtÇmItdFf-pe-dItVeWqwng-qp
                        bbbbb             bbbbbbbbbb       bbbb       

                             60        70        80        90        100 
1pfc     ( 387 )    ps--dykntppvfdt-dgsFfLySrlkvdtdawnngesftÇsVmheal--
1fc1ac1  ( 284 )    vhnaktkpr-eqqyn--styrvvSvLtVlhqnwldgkeYkÇkVsNkalp-
1fc1ac2  ( 388 )    en--nykttppvlds-dgsffLySkLtVdksrWqqgnvFsÇSVmHealhn
1mamhc   ( 165 )    ls-ssvhtfpAllqs--glytMsSsVtvpsstWp-sqtVtÇsVahpa---
4fabhc   ( 164 )    ls-sgvhtfpavlqs--dlytlsSsVtvtsstwp-sqsinVaHpas--
3hflhc   ( 165 )    ls-sgvhtfpAvlqs--dlytLsSsVtvpssprp-setVnVaHpas--
2fb4hc   ( 164 )    lt-sgvhtfpAvlqss-glyslsSvVtVpssslg-tqtYiÇnVnHkps--
1dfblc   ( 154 )    sg--nsqesvteqdskdstysLsStLtlskadYekhkvYaÇeVtHqgls-
2fbjlc   ( 154 )    rq-ngvlnswtdqdskdstysMsStLtLtkdeYerhnsYtÇeAtHktst-
2fb4lc   ( 157 )    vk-agvettkpskqs-nnkyaAsSyLsLtpeqWkshrsYsÇqVtheg---
2fbjhc   ( 164 )    kd-Ittvnfppalasg-grytmsNqLtLpaveÇpegesVkÇsVqhd-s--
1cqka    (  49 )    ae--nykntqpimdt-dgsyfVySkLnvqksnWeagntFtÇsVlHeglhn
                         bbb   bb      bbbbbbbbb           bbbbb      

                             110  
1pfc     ( 433 )    pnhviqksisrspg
1fc1ac1  ( 330 )    -apiektiska-kg
1fc1ac2  ( 435 )    h-ytqkslsl    
1mamhc   ( 208 )    ssttvdkKle    
4fabhc   ( 208 )    stkvdkkIe     
3hflhc   ( 216 )    stkvdkkI      
2fb4hc   ( 209 )    ntkvdkrVepks-c
1dfblc   ( 201 )    -spvtksfnrgec 
2fbjlc   ( 202 )    -spivksfnrnec 
2fb4lc   ( 202 )    -stvektvaptecs
2fbjhc   ( 209 )    npvqeldVnÇsg  
1cqka    (  96 )    h-htekslsh    
                       bbbb       


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