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Align your sequence(s)

isocitrate and isopropylmalate dehydrogenase

class : alpha beta number of structures : 5 average size : 367 average PID : 42 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1ipd rasmol 1 - 345 - 3-isopropylmalate dehydrogenase Thermus thermophilus 2.20 18.50
1a05 rasmol 1 A 357 A 3-isopropylmalate dehydrogenase Thiobacillus ferrooxidans 2.0 19.77
2ayq rasmol 1 A 356 A 3-isopropylmalate dehydrogenase Bacillus coagulans 3.0 18
1cnz rasmol 1 A 363 A 3-isopropylmalate dehydrogenase Salmonella typhimurium 1.76 19.8
3icd rasmol 3 - 416 - isocitrate dehydrogenase Escherichia coli 2.50 18.00
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : isodh  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1ipd   (   1 )                            MkVAVLpGdgIGpeVTeAALkVLraL
1a05a  (   1 )                           mkkIAIFaGDgIGpeIVaAArqVLdaV
2ayqa  (   1 )                          mkMkLAVLpGdgIGpeVMdAAirVLktv
1cnza  (   1 )                        msknyhIAVLpGdgiGpeVMaQAlkVMdaV
3icd   (   3 )    skvvvpaqGkkItlqngklnVpenPIIPyIeGdgIGvdVTpAMlkVVdaA
                                           bbbbbbb   aaaaaaaaaaaaaaa

                           60        70        80        90        100 
1ipd   (  27 )    deae---glgLayevfpFGGaAidafg--ePFPepTrkGVeeAeAVLLGs
1a05a  (  28 )    dqaa---hlgLrcteglVGGaALdasd--dPLpaaslqlAmaAdAVILGA
2ayqa  (  29 )    Ldnd---gheAvfenalIGGaAideag--tplpeeTldiCrrSdAILLGa
1cnza  (  31 )    rsrf---dmrIttshydVGGiAidnhg--hplpkaTvegCeqAdAILFGs
3icd   (  53 )    VekaykgerkIswMeIyTGekSTqvygqdvwlpaeTldlIreYrVAIKGP
                  aaaa       bbbb    aaaaaaa       aaaaaaaa   bbbbbb

                           110       120       130       140       150 
1ipd   (  72 )    VGgpkwdglprkisPe-tGllsLrksQdLfAnLrpAkVFpgLerlSplke
1a05a  (  73 )    VggprwdayppakrPe-qGllrLRkgLdLyANlrpAqIfpqlldaSplrp
2ayqa  (  74 )    VggpkwdhnpaslrPe-kGllgLrkeMgLFAnLrpVkAYatLLnaSplkr
1cnza  (  76 )    VgGpkwenlppesqPergAllpLrkhfkLFSNlrpAkLyqgLeafCplra
3icd   ( 103 )    Lttp--vgg-----girsLnvaLrqeLdLyiClrpvryyqgT--pSpvk-
                            333    aaaaaaaaa    bbbbbbb            a

                           160       170       180       190       200 
1ipd   ( 121 )    eiAr-gVdVLIVrEltgGiyfgeprgm--se-------------------
1a05a  ( 122 )    elVr-dVdIlVVRELTgDiyfgqprglevid-------------------
2ayqa  ( 123 )    erVe-nVdLVIVrELtgGlyfgrpserr-gp-------------------
1cnza  ( 126 )    diAangFdIlCVRELtgGiyfgqpkgregsgq------------------
3icd   ( 143 )    -hpe-lTdMVIFRENseDiyag-iewkadsadAekvIkflreemgvkkir
                  aaa    bbbbbbb           bb                       

                           210       220       230       240       250 
1ipd   ( 149 )    -a--eawnterYskpeVerVArvAFeAArkrr-khVVSVDkanvl-evge
1a05a  ( 152 )    -gkrrgfntmvYdedeIrrIAhvAFraAqgrr-kqLcSVDkAnvl-ettr
2ayqa  ( 152 )    -genevvdtlaYtreeIerIIekAFqLAqirr-kkLaSVDkAnvl-esSr
1cnza  ( 158 )    -y-ekafdtevYhrfeIerIAriAFesArkrr-rkVTSIDkanvl-qsSi
3icd   ( 190 )    fpehcgigikpCseegTkrLVraAIeyAiandrdsVTLVHkGnimkftEg
                       bb      aaaaaaaaaaaaaaaa     bbbbbb      aaaa

                           260       270       280       290       300 
1ipd   ( 194 )    fWrkTVeeVGr-gyp-------------------dValehqyvdaMamhL
1a05a  ( 199 )    lWreVVteVar-dyp-------------------dVrlshmyvdnAamqL
2ayqa  ( 199 )    mWreIAeetak-kyp-------------------dVeLshmlvdsTsmqL
1cnza  ( 204 )    lWreIVndvak-tYp-------------------dVelahmyidnAtmqL
3icd   ( 240 )    aFkdwGyqLAreefgGelidggpwLkVkNpntgkeIvIkdviadaFlqqI
                  aaaaaaaaaa                          bbbbbbaaaaaaaa

                           310       320       330       340       350 
1ipd   ( 224 )    vrsParFDVVVTgNifGdiLsdlAsvLPgslgLLpsASlGr-gtpVFePv
1a05a  ( 229 )    iraPaqFDVLLTgNmfGdiLSdeAsqLTGsigMLpSASlGe-grAMYePI
2ayqa  ( 229 )    ianPgqFDVIVTeNmfGdiLSdeASvITgSlgMLPsASLrsdrfGMYePv
1cnza  ( 234 )    ikdPsqFDVLLCSNlfGdiLSdeCAmITgSmgMLpSASlneqgfGLYePA
3icd   ( 290 )    llrpaeYdVIACMNlnGdyISdaLaaqVggigIapGANiGd-eCALFEAt
                  aa 333  bbbb aaaaaaaaaaaaa        bbbbb     bbbbb 

                           360       370       380       390       400 
1ipd   ( 273 )    hgsapdiagkgiAnPTAAIlSAAMMLEHAfglveLArkVedAVakALle-
1a05a  ( 278 )    HgSapdiagqdkANPLATIlSVAmMLrhsLnaepwAqrVeaAVqrVLdqg
2ayqa  ( 279 )    hgsapdiagqgkANPLGTVlSAALMLrYSfglekeAaaIekAVddVLqdg
1cnza  ( 284 )    ggSapdiagkniANPIAQIlSLAlLLrySLdAndAAtaIeqAInrAleeg
3icd   ( 339 )    hgtapkyagqdkvNPGSIILSAemMLrhM-gWteAAdlIvkGMegAInak
                      333        aaaaaaaaaaaaa    aaaaaaaaaaaaaaaa  

                           410       420       430 
1ipd   ( 322 )    tpPpdLg------gsagteaFTatVlrhLa   
1a05a  ( 328 )    lrTadIAap--gtpvigTkaMGaaVvnALnlk 
2ayqa  ( 329 )    yCTgdLqVa--ngkvvsTieLTdrLiekLn   
1cnza  ( 334 )    vrTgdLarg--a-aavsTdeMGdiIaryVaegv
3icd   ( 388 )    tVTydFerlmdgAkllkCseFGdAIienm    
                                   aaaaaaaaaa      


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