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Align your sequence(s)

GTP-binding protein

class : alpha beta number of structures : 8 average size : 174 average PID : 33 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1kao rasmol 1 - 167 - rap2a Homo sapiens 1.70 18.6
1gua rasmol 1 A 167 A rap1a Homo sapiens 2.00 22.0
5p21 rasmol 1 - 166 - Harvey-ras p21 Homo sapiens 1.40 19.60
1mh1 rasmol 1A - 181 - rac1 Homo sapiens 1.38 17.5
1ftn rasmol 4 - 180 - rhoA (H12) Homo sapiens 2.10 18.6
1etu rasmol 5 - 200 - elongation factor Tu (domain I) Escherichia coli 2.90 18.00
1a4r rasmol 1 A 190 A g25k GTP-binding protein, placental isoform Homo sapiens 2.5 22.8
1zbd rasmol 16 A 192 A ras-related protein rab-3a Rattus norvegicus 2.60 23.3
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : RHO  RAS  RAN  RAB  
PFAM : arf  GTP_EFTU  ras  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1kao   (   1 )         mreykVVVLGsggVGKSALTvQFvtgtfiekyd-pti-edfyrke
1guaa  (   1 )         mreYkLVVLGsggVGKsALTvQFvqgifvdeyd-pti-edsyrkq
5p21   (   1 )         mteYkLVVVGaggVGKsALTiqLiqnhfvdeyd-pTi-edsyrkq
1mh1   (   1A)      gs-pqaIkCVVVGdgaVGKtCLLiSyttnafpgeyi-ptv-fdnysan
1ftn   (   4 )          irkkLVIVGdgaCGKTCLLiVnSkdqFpevyv-ptv-fenyvAd
1etu   (   5 )    fert-kphvnVGTIGhvdHGKttLtaAIttV-Laktyg itintshveYd
1a4ra  (   1 )         mqtIkCVVVGdvaVgKtcLLiSyttnkfpseyv-ptv-fdnyavt
1zbda  (  16 )     sh fdy FkILIIGnssVgKtsFLfrYaddsftpafv-stvgidfkvkt
                         bbbbbbb      aaaaaaaaaa               bbbbb

                           60        70        80        90        100 
1kao   (  44 )    ievdsspSVLeIlDTagteqfasmrdlyIknGqGFILVYSLvnqqSfqdI
1guaa  (  44 )    veVdcqqCmLeIlDtAGteqftamrdlyMknGqGFALVYSItaqstfndL
5p21   (  44 )    vvIdgetClLdIlDTAGqeeysamRdqyMrtGeGFLCVFAInntkSfedI
1mh1   (  44 )    vmVdgkpVnLgLwDTAGqedydrlRplsYpqTdVSLICFSLvspaSfenV
1ftn   (  46 )    IeVdgkqVeLaLwDTAgqedydrlrplsYpdTdVILMCFSIdspdSlenI
1etu   (  71 )    Tp----trhYaHvDCpghadYvkNMitgaaqMdGAILVVAAtdg-pmpqT
1a4ra  (  44 )    vmiggepytLgLfDTaGqedydrlRplsYpqTDVFLVCFSVvspsSfenV
1zbda  (  64 )    iyrndkrIkLqIwDTAGleryrtiTTayYrgA GFIL YdItneeSfnaV
                  bbb  bbbbbbbb                    bbbbbbb   aaaaaaa

                           110       120       130       140       150 
1kao   (  94 )    kp-mrdqIirvkryekVpVILVGNkvdles------e------reVssse
1guaa  (  94 )    qd-lreqIlrvkdtedVpMILVGNkcdled------e------rvVgkeq
5p21   (  94 )    hq-yReqIkrVkdsddVpMVLVGNkcdl-a------a------rtVesrq
1mh1   (  94 )    rakWypeVrhhCp--ntpiILVGTkldlrddkdtieklkekkltpitypq
1ftn   (  96 )    pekWtpeVkhfCp--nvpIILVGNkkdlrndehtrrelakmkqePVkpee
1etu   ( 116 )    re-HIllGrqvg---VpyIIVFLNKCdmVdd---------eellelveme
1a4ra  (  94 )    kekWvpeIthhÇp--kTpfLLVGTqidlrddpstieklaknkqkPitpet
1zbda  ( 114 )    qd-wStqIktySw-dnAqVLLVGNkcd ed------------ervVsser
                  aa aaaaaaaa       bbbbbb                       aaa

                           160       170       180       190       200 
1kao   ( 131 )    GralAeeW-----gcpfmeTsAks--------ktmVdeLFaeIVrqMnya
1guaa  ( 131 )    GqnlArqWc----ncaFleSSAks--------kinVneIFydLVrqinr 
5p21   ( 130 )    AqdlArsy-----gipYieTSAkt--------rqgVedAFytLVreirqh
1mh1   ( 142 )    GlaMAkeIg----AvkYleCSAlt--------qrgLktVFdeAIravLcp
1ftn   ( 144 )    GrdmAnrIg----AfgYmeCSAkt--------kdgVreVFemATrAAlq 
1etu   ( 153 )    VrelLsqydFpGddTpIVrGSAlkAlegdaeweakIleLAgfLdsyIp  
1a4ra  ( 142 )    AeklArdlk----AvkYveCSalt--------qkgLknVFdeAilaAlep
1zbda  ( 150 )    GrqlAdhlg-----feffeASAkd--------ninVkqTFerLVdvicek
                  aaaaaaaa        bbb                aaaaaaaaaaaa   

                           210 
1kao                         
1guaa                        
5p21                         
1mh1   ( 180 )    pp         
1ftn                         
1etu                         
1a4ra  ( 180 )    pepkksrrçvl
1zbda  ( 188 )    sesl------d
                             


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