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Align your sequence(s)

glycosyl hydrolase family 33 (sialidases or neuraminidases)

class : all beta number of structures : 4 average size : 397 average PID : 23 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
2sli rasmol 277 - 759 - intramolecular trans-sialidase, C-terminal domain Macrobdella decora 1.8 18.5
1eur rasmol 47 - 407 - sialidase, N-terminal domain Micromonospora viridifaciens 1.82 17.3
3sil rasmol 4 - 382 - sialidase Salmonella typhimurium 1.05 N/A
1kit rasmol 217 - 781 - sialidase Vibrio cholerae 2.3 17
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : BNR  
CAZy : GH_33  
other info key to JOY annotation | show related PDB structures

                          10        20        30        40        50  
2sli  ( 277 )          genIFyag----------------dvTeSnYFRIPSLltLst--
1eur  (  47 )    geplyteqdLavngre-----------------gfpnYrIPALTVTpd--
3sil  (   4 )         eksvVFkaegEhFtdqkgntivGsGsggTTkyFRIPAMÇTTsk--
1kit  ( 217 )            vIFrG-----------------------pDrIPSIVASsvtp
                                                      bbbbbbbb     

                          60        70        80        90        100 
2sli  ( 303 )    gtVISAADARYGGThdSk--SKINIAFAkStdgGntWsePtlpLk-FddY
1eur  (  78 )    gdLLASYDGRptgidap---gpNsILQrrStdgGrtWgeqqvVsa-Gqtt
3sil  (  47 )    gTIVVFADARHntasdq---SfIDTAAArStdgGktW-nkkIAIyNdrvn
1kit  ( 236 )    gVVTAFAEkRvgggdpGalsNtNdIITrtSrdgGitwdtelnlTeqiNvs
                   bbbbbbbb            bbbbbbbb          bbbb      

                          110       120       130       140       150 
2sli  ( 350 )    iaknidWprdsvGknvqIqgSASYidPVLLEDk--ltkrIFLFADLMP-A
1eur  ( 124 )    a------------------pikGfSdPSYLVDr--etgtIFNFHVySq--
3sil  (  93 )    s------------------klSRVMDPTÇIVAniqgreTILVMVGkWNnn
1kit  ( 286 )    -------------------defDFSdPRPIYdp--ssntVlVSYArWp-t
                                       bbbbbbbbbb      bbbbbbbbb   

                          160       170       180       190       200 
2sli  ( 397 )    giGss--nAsvgSGfkevngkkyLkLrwhkdagraydyTIRekgvIynda
1eur  ( 152 )    rqgfa--gSrp---------------------------------------
3sil  ( 125 )    dktWg--ayrd---------------------------------------
1kit  ( 314 )    dAAqngdrikp---------------------------------------
                     3                                             

                          210       220       230       240       250 
2sli  ( 445 )    tnqptefrVdgeynLyqhdtnltckqydYnfsgnnLiesktdvdvnmNIF
1eur  ( 161 )    -----------------------------------------------gtd
3sil  ( 134 )    -----------------------------------------------kap
1kit  ( 325 )    --------------------------------------------------
                                                                   

                          260       270       280       290       300 
2sli  ( 495 )    YknSvFkAfpTNYLAMrySddeGaswsdLdI-vSsfKp--evSkfLVVGP
1eur  ( 164 )    pa-----dpnVLHAnVAtStdgGltWshrt--ITadItpdpgwrSRfAAS
3sil  ( 137 )    dt--------dWdLvLykStddGvtFskvetnIhdiVtkngtISAMLGGV
1kit  ( 325 )    --------wmpngifySvYdVasgnwqaPi---------------vnPGP
                             bbbbbbb       bbbb              bbbb  

                          310       320       330       340       350 
2sli  ( 542 )    GiGkqIstge-----nagRLLVPLySks------sAELGFMySddhGdnW
1eur  ( 207 )    GegiQLrygp-----hagRLIQQYTIIna---agafqAVSVYSddhGrtW
3sil  ( 179 )    GSGlqln---------dgkLVFPVQMVrtknittvlnTSFIyStd-GitW
1kit  ( 549 )    GHGitLtrQqnIsgSqngRLIYPAIvLdr----ffLnVmSiySddgGsnw
                 bb bb              bbbbbbbb        bbbbbbbb       

                          360       370       380       390       400 
2sli  ( 581 )    tyveAdnlt----------gGatAEAQIVeMpdGsLKTYLRtg-------
1eur  ( 249 )    rAgeAvg-------------vgMdENkTVELSdgrVlLNSrDsar-----
3sil  ( 219 )    slps------------gyCeGfgSENNIIef-naSLVNNIrns-------
1kit  ( 595 )    qtgstLpipfrwksssiletLePSeADMVElqnGdLLLTArLdfnqiVng
                 bb                       bbbbb     bbbbb          

                          410       420       430       440       450 
2sli  ( 614 )    --sncIAeVTSidGGetWsdrvpLq---gIstTsygTQLSVInYs--qpi
1eur  ( 281 )    --sgyRkvAvStdGgHsYgpvtid-----rdLpDPTNNASIirAfpdapa
3sil  ( 249 )    ---glRrSfeTkdfGktWteFppMdkkV--dNrnhGVQGSTitIpsg---
1kit  ( 645 )    vnyspRQQFlSkdGGitWslleannanvFsniStgtVDASItrFeqs---
                       bbbbb          bb                bbbbbb     

                          460       470       480       490       500 
2sli  ( 657 )    d-----gkpAIILSSPnat----ngRknGkIwIGLVndtgntgidkysVe
1eur  ( 324 )    gsarAk---vLLFSNAAsq----tsrsqGTIrmScddGq----------t
3sil  ( 291 )    ------nklVAAHSSAqNk-nndytRSdISLyAHNLysg----------e
1kit  ( 692 )    ---dgs--hFLLFTNPqGnpagtngrqnLGLWFSfdeGv----------t
                         bbbbbbbb            bbbbbb                

                          510       520       530       540       550 
2sli  ( 698 )    WkysyaVdt---pqmgYSYSCLAeLpd---gqVGLLYEkYdSwsrnelHl
1eur  ( 357 )    WpvskvFqpgs-----MsySTLtaLp---dgtYGLLYEP-g---------
3sil  ( 324 )    vklIddFypkvgnasgAGYSCLsyrknvdketLYVVYEA-n---------
1kit  ( 727 )    WkgpiqLvnga-----SaySDIyqLd---senAIVIVEtdn---------
                  bbbbb             bbbbb        bbbbbb            

                          560       570 
2sli  ( 742 )    kdiLkFekys-iseLtgqa    
1eur  ( 389 )    -tGIrYAnFn-lawLgg--icap
3sil  ( 364 )    -GsIeFQdL--srhLpvIksyn 
1kit  ( 760 )    -snMrilrmpItllkqkltlsqn
                    bbbbbb  aaaa        


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