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Align your sequence(s)

cytokine -- granulocyte colony stimulating factor

class : all alpha number of structures : 3 average size : 153 average PID : 82 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1bgd rasmol 10 - 173 - Granulocyte colony stimulating factor Canis familiaris 2.30 20.7
1bgc rasmol 9 - 173 - Granulocyte colony stimulating factor Bos taurus 1.70 21.30
1rhg rasmol 9 A 172 A Granulocyte colony stimulating factor Homo sapiens 2.20 21.50
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : IL6  
SMART : IL6  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1bgd   (  10 )     LpqsFllkCleqMrkVqadGtaLqetLçathqlçhpeelvllghalgIp
1bgc   (   9 )    sLpqsfLlkCleqVrkIqadgaeLqerLçaahklçhpeelmllrhslgIp
1rhga  (   9 )     LpqsfllkCleqVrkIqgdGaaLqekLçatyklçhpeeLvllghslgIp
                     aaaaaaaaaaaaaaaaaaaaaaaaaaaa         a  aaa    

                           60        70        80        90        100 
1bgd   (  59 )    qPpLssÇssqalqlmgÇLrqLhsgLflYqgLLqaLagIspeLaptLdtLq
1bgc   (  59 )    qApLssÇssqslqlrgÇLnqLhgGLflYqgLLqaLagIspeLaptLdtLq
1rhga  (  58 )    wapl         lagcLsqLhsGLflYqgLLqaLegIspeLgptLdtLq
                                aaaaaaaaaaaaaaaaaaaa        aaaaaaaa

                           110       120       130       140       150 
1bgd   ( 109 )    ldTtdFAinIwqqMedlgmap tmPaFtsafqrrAGGVlVAsnLqsfLel
1bgc   ( 109 )    ldVtdFAtnIwlqMedlgaAp amptFtsafqrrAGGVLVAsqLhrFLel
1rhga  ( 108 )    ldVadFattIwqQMeelgm    mpaFasafqrrAGGVLVAshLqsfLev
                  aaaaaaaaaaaaaaaa             aaaaaaaaaaaaaaaaaaaaa

                           
1bgd   ( 165 )    AyraLrhfa
1bgc   ( 165 )    AyrGLryla
1rhga  ( 164 )    SyrvLrhla
                  aaaaaaa  


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