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Align your sequence(s)

tRNA synthetases class II (D and K)

class : multi domain number of structures : 3 average size : 470 average PID : 28 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1asz rasmol 68 A 557 A aspartyl-tRNA synthetase Saccharomyces cerevisiae 3.00 20.3
1lyl rasmol 14 A 502 A lysyl-tRNA synthetase Escherichia coli 2.80 19.3
1b8a rasmol 1 A 438 A aspartyl-tRNA synthetase Pyrococcus kodakaraensis 1.90 16.8
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : tRNA_anti  tRNA-synt_2  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1asza  (  68 )    edtakdnygklpliqsrdsdr--------------tgqkrvkFvdLd---
1lyla  (  14 )               fndelrnRreklaalrqqgvAfpndFrrdhtSdqLheeF
1b8aa  (   1 )                                        myrthySseIt---
                                                                    

                           60        70        80        90        100 
1asza  ( 101 )    ----eakdsd--kevlFrArVhntrqqgatlAfLTLRqqaslIqGlVkan
1lyla  (  53 )    dakdnqeLeslnieVSVagrMmtrrimg-kaSfVtLqdvggrIqLyVar-
1b8aa  (  12 )    ----e-elng--qkVkVaGwVwevkdlg-gikfLwIrDrdgiVqItApk-
                               bbbbbbbbbbbbb    bbbbbbbb  bbbbbbbb  

                           110       120       130       140       150 
1asza  ( 145 )    kegtisknMVk-wAGsLnlESiVlVrGiVkkvdepiksAtvqnLeIhItk
1lyla  ( 101 )    --dsLpegvYndqFkkWdlGDiIGArGtLfktqtg-------eLSIhCte
1b8aa  (  53 )    --kkVdpeLfk-lIpkLrsEDvVAVeGvVnftp-kAk----lgfeIlPek
                          aaa          bbbbbbbbbb            bbbbbbb

                           160       170       180       190       200 
1asza  ( 194 )    IyTisetpealpilLedAsrseaeaeaaglpvvnldtrLdyRviDlr-Tv
1lyla  ( 142 )    LrlltKalrplp                     dqevryrqRylDliand
1b8aa  (  95 )    IvVlnraetplpldPtgk------------vkaeldtrLnnRfMDlr-rp
                  bbb                               aaaaa  aaaa    a

                           210       220       230       240       250 
1asza  ( 243 )    tnqAIfrIqaGVceLFreyLatkkFtevhtpkllgapseggssvfevtyf
1lyla  ( 178 )    ksrqtfvvrskIlaaIrqfMvargFmeveTpmmQviPgGasArpfithhn
1b8aa  ( 132 )    eVmAIfkIrssVfkAVrdfFhengFieihtpkiiatateggtelfpmkyf
                  aaaaaaaaaaaaaaaaaaaaaa   bb     bb                

                           260       270       280       290       300 
1asza  ( 293 )    --kgkAylAqspqfnKQqlIvadferVYEigpVfraensnthRhMteFtG
1lyla  ( 228 )    aldldmylRIAPelyLKrlVvggferVFEInrNfrneg-isvrhNpeftm
1b8aa  ( 182 )    --eedAflAesPQlyKEimMasgldrVyEIapifraeehnttrhLneaws
                        bb    aaaaaa       bbbbbbbbb            bbbb

                           310       320       330       340       350 
1asza  ( 341 )    LdMEMAFeehYheVLdtLseLFvfIFseLpkrfaheIelVrkqypveeFk
1lyla  ( 277 )    MeLYmAya-dyhdLieLTesLFrtLAqevlg---------ttkVtYgehv
1b8aa  ( 230 )    IDSEMAfIedEeeVMsFLErLVahAInyVrehnakeldiln--feLeePk
                  bbbbbb     aaaaaaaaaaaaaaa  aa                    

                           360       370       380       390       400 
1asza  ( 391 )    lPkdgkmvrltYkeGIemLraa-------------------gkeIgdfed
1lyla  ( 317 )    FdFgkpFekltMreAIkkyrpeTdmadLdnfdaAkalAesigitVekswg
1b8aa  ( 278 )    l----pFprvsYdkAleiLgdl-------------------gkeIpwGed
                          bbbaaaaaaaa                               

                           410       420       430       440       450 
1asza  ( 422 )    LstenekfLGklVrdkydTdFYILDkFPLeirpfyTmpdpanpkySNSYd
1lyla  ( 367 )    lgrIVteIFdevAeahLi-qPTFIteYpaevS-pLArrndvnpeiTdrFe
1b8aa  ( 305 )    IdteGerlLgkyMmenenapLYFLyqYPseakpFyImkydnkpeiCrAFd
                    aaaaaaaaaa         bbbb                       bb

                           460       470       480       490       500 
1asza  ( 472 )    FFMrgeeILsGAqRIhdhalLqerMkah------glspedpgLkdYCdgF
1lyla  ( 415 )    FFIggreIGnGfSELndaedQaeRFqeqvnakaagddeAmfydedYvtaL
1b8aa  ( 355 )    LEYrgveISsgGQREhrhdiLveQIkek------glnpe--sFefYLkaF
                  bbb  bbbbbbbb    aaaaaaaaaa                aaaaa  

                           510       520       530       540 
1asza  ( 516 )    sygCppHAGGgIGLERVVMFYLdLknIrrAslfPrdpkrlrp
1lyla  ( 465 )    eygLppTAGLgIgIDrMIMLFtnshtirdVilfPamrp    
1b8aa  ( 397 )    rygMppHGGFgLgAErLIkQMLdlpnIreVilfPrDrrRltp
                        bbbbbbbaaaaaaaa      33             


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