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Align your sequence(s)

Adenovirus fiber protein head domain (knob domain)

class : all beta number of structures : 3 average size : 188 average PID : 52 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1knb rasmol 396 - 581 - fiber protein Human adenovirus type 5 1.7 15.8
1qhv rasmol 388 A 582 A fiber protein Human adenovirus serotype 2 1.51 10.9
1nob rasmol 403 A 587 A fiber protein Human adenovirus type 12 2.60 24
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : adeno_fiber  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1knb   ( 396 )            ndkl---TLwTTpaPspnCrLnaekDAkLtLvLtkcgsqIlA
1qhva  ( 388 )    aitignknddkl---tLwTtpdpspnCrIhsdnDCkFtLvLtkcgsqVlA
1noba  ( 403 )             tpydpltLwTtpdPppnCsliqelDAkLtLcLtkngsiVnG
                                 bbb                bbbbbbbbbb  bbbb

                           60        70        80        90        100 
1knb   ( 435 )    tVsVlAvkgsLApIsgtvqsAhLiIrFdenGvLln--nsfLdpe-yWnFr
1qhva  ( 435 )    tVaAlAvsgdLssMtgtvasVsIfLrFdqnGvLme--nSSLkkh-yWNfr
1noba  ( 444 )    iVsLvGvkgnLlnIqsttttvGVhLVFdeqGrLitstpTaLvpqasWgYr
                  bbbbbb             bbbbbbbb                    bbb

                           110       120       130       140       150 
1knb   ( 482 )    ngdlTegtaytnAvgFMPnlsaypkshgktakSnivsqVyLngdktkpVt
1qhva  ( 482 )    ngnsTnanpytnavgfMPnllaypktqsqtakNnivsqvyLhgdktkpMi
1noba  ( 494 )    qgqsvStntvtnGlgFMPnvsayprpnaseakSqmvsltyLqgdtskpIt
                  b  bb        33               333bbbbbbb       bbb

                           160       170       180       190       200 
1knb   ( 532 )    LtItLNgTqet-gdttpSaYSMsFsWdWsghnYineiFaTssytFsYiAq
1qhva  ( 532 )    LtItLNGtsEStetsevStYSMsFtWsWesgkYttetFaTnsytFsYiAq
1noba  ( 544 )    MkVaFNg-iTsl-----nGySLtFmWsgLs-nyinqpFsTpscsFsYiTq
                  bbbbb              bbbbbbbb               bbbbbb  

                   
1knb   ( 581 )    e
1qhva  ( 582 )    e
1noba  ( 587 )    e
                   


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