Home   |   Search   |   Browse   |   Software   |   Help   

Align your sequence(s)

Ubiquitin homologues

class : alpha plus beta number of structures : 3 average size : 74 average PID : 68 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1ubq rasmol 1 - 76 - ubiquitin Homo sapiens 1.80 17.6
1ndd rasmol 1 A 74 A ubiquitin-like protein nedd8 Mus musculus 1.60 21.9
1bt0 rasmol 1 A 73 A rub1 Arabidopsis thaliana 1.70 18.0
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : UBQ  
PFAM : ubiquitin  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1ubq   (   1 )    mqIfVktltgktItLeVepsdtIenVkakIqdkegippdqQrLifagkqL
1ndda  (   1 )    mlIkVktltgkeieIdIeptdkVerIKerVeekegippqqQrLiysgkqM
1bt0a  (   1 )    mlIkVktltgkeIeIdIeptdtIdrIkerVeekegippvqQrLiyagkqL
                   bbbbb     bbbbb      aaaaaaaaaaaa   333bbbbb  bb 

                           60        70     
1ubq   (  51 )    edgrtLsdynIqkestLhLvlrlrgg
1ndda  (  51 )    ndektAadykIlggsvLhlvlalr  
1bt0a  (  51 )    addktAkdynIeggsvLhLvlal   
                        333      bbbbbb     


For comments or questions, please send us email. Copyright © 1997-2005 The HOMSTRAD authors