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Align your sequence(s)

DNA topoisomerase

class : multi domain number of structures : 2 average size : 258 average PID : 25 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1cy9 rasmol 214 A 473 A DNA topoisomerase I Escherichia coli 1.80 20.5
1i7d rasmol 216 A 487 A DNA topoisomerase III Escherichia coli 2.05 23.3
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Topoisom_bac  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1cy9a  ( 214 )    fvpeefweVdAsTtTpsgeaLaLqVthqnd------kpFrPvnkeqTqaA
1i7da  ( 216 )    fvakdFfeVkAhIvtpaderFtAiWqpseacepyqdeegrLlhrplAehv
                      bbbbbbbbbb     bbbbbb                  aaaaaaa

                           60        70        80        90        100 
1cy9a  ( 258 )    vslLekarYsVleredkpttskPgaPFiTstLqqaAstrlgFgvkkTmmM
1i7da  ( 266 )    vnrIsgqpAiVtsyndkresesAplPFslsaLqieAakrfglsaqnVldi
                  aaaa    bb  bbbbbbbbb       aaaaaaaaaaaa   aaaaaaa

                           110       120       130       140       150 
1cy9a  ( 308 )    AqrLyea-gyItymrtdstnLsqdAvn---mVrgyIsdnfg-----kkyl
1i7da  ( 316 )    CqkLyethkLItfPrSdcryLpeehfagrhavmnAIsvHapdllpqpvVd
                  aaaaaa                        aaaaaaaaa           

                           160       170       180       190       200 
1cy9a  ( 349 )    pespnqyas------heAIrPsdVnvmAesLkdMeadAqkLYqlIwrqFV
1i7da  ( 366 )    pdirnrCWddkkvdahhAIIPtarssai----nLtenEakVYnLIARQYL
                                                     aaaaaaaaaaaaaaa

                           210       220       230       240       250 
1cy9a  ( 400 )    ACQMtpAkydsttLtVgAgdFrLkArGrilrfdGwtkVmd----------
1i7da  ( 412 )    MQFCpdAvFrkcvIeLdIakGkFvakarfLaeaGWRtLlgskerdeendg
                  a     bbbbbbbbbb      bbb bbbbbb 3333             

                           260       270    
1cy9a  ( 448 )    riLpaVnkgdaLtlveLtpaqhftkp
1i7da  ( 462 )    tpLpvVakgdeLlCekGeVverqtqp
                            bbbbbbbbbbbbb   


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