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Align your sequence(s)

Serine hydroxymethyltransferase

class : alpha beta number of structures : 2 average size : 443 average PID : 47 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1dfo rasmol 2 A 417 A serine hydroxymethyltransferase Escherichia coli 2.40 17.4
1bj4 rasmol 11 A 480 A serine hydroxymethyltransferase, cytosolic Homo sapiens 2.65 21
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : SHMT  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1dfoa  (   2 )             lkremniadydaelwqameqekvrqeehIELiAseNYtspr
1bj4a  (  11 )    dadlwsshdamlaqplkdsdvevyniikkesnrqrvgLeLiAseNfasra
                                 aaaa aaaaaaaaaaaaaaaa bb         aa

                           60        70        80        90        100 
1dfoa  (  43 )    VmqaqgsqltnkyAEgypgkRyyggCeyVdivEqlAidrAkelFgAd---
1bj4a  (  61 )    VlealgsclnnkySegypgqRyyggTefIdelEtlCqkrAlqAYkLdpqc
                  aaaaa  333     bb  bb     aaaaaaaaaaaaaaaaa       

                           110       120       130       140       150 
1dfoa  (  90 )    -yANVQPhsGsqANfAVYtaLLepgdtVLGMnlahGGHlTHGsp-----v
1bj4a  ( 111 )    wgVNVQPysGspANfAVYtaLVephgrIMGLdlpdGGhltHGfmtdkkki
                   bbb     aaaaaaaaaaaa     bbbbb       333         

                           160       170       180       190       200 
1dfoa  ( 134 )    nfSGklYnivpYgId-atghIdyadLekqAkehkPkMIIGGFSAYSGvVd
1bj4a  ( 161 )    saTSifFeSmpYkVnpdtGyInydqLeenArlfhPkLIIAGtsCySrnLe
                   aaaaa bbbbb          aaaaaaaaaaa   bbbb          

                           210       220       230       240       250 
1dfoa  ( 183 )    WakMreIAdsigAyLFVDMAHVAGLVAAgvYpnPVphAhVVTTTTHKTLA
1bj4a  ( 211 )    YarLrkIAdengAyLMADMAHiSGLVAAgvVpsPFehChVVTTTThKTLr
                  aaaaaaaaaa   bbbbb    aaaaa            bbbbb      

                           260       270       280       290       300 
1dfoa  ( 233 )    GPrGGLILAk----------g--gseelykkLnsaVFpggqggPlMhvIa
1bj4a  ( 261 )    GcrAGMIFYrkgvksvdpatgkeilYnLeslInsaVfpglqggPhNhaIa
                      bbbbb                  aaaaaaaaa         aaaaa

                           310       320       330       340       350 
1dfoa  ( 271 )    GKAvALkeAmepefktyQqqVakNAkAMVevFlergYkVvSggTdNHLFL
1bj4a  ( 311 )    GVAvALkqAmtleFkvyQhqVvaNCraLseaLtelgYkIvTggSdNHLIl
                  aaaaaaaa   aaaaaaaaaaaaaaaaaaaaaaa   bb        bbb

                           360       370       380       390       400 
1dfoa  ( 321 )    VdLvdknltGkeAdaALgrAnItVnkNsVpnDpkspfvTSGIRVGTPAIT
1bj4a  ( 361 )    VDLrskgTdGgRAekVLeaCsIaCnkntCpgDr-salrPSGLrLGTPALT
                  bb 333   aaaaaaaaaa  bb bb              bbbbb aaaa

                           410       420       430       440       450 
1dfoa  ( 371 )    rRgFkeaeAkeLAgwMCdVLdsin-----------------------dea
1bj4a  ( 410 )    SRgLlekdFqkVAhFIhrGIeLTlqIqsdTgvaatlkeFkerlagdkyqa
                  a    aaaaaaaaaaaaaaaa                           aa

                           460       470 
1dfoa  ( 398 )    vIerIkgkVldICarypVy-a
1bj4a  ( 460 )    avqaLreeVesfAslfplpgl
                  aaaaaaaaaaaaa        


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