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Align your sequence(s)

Penicillin amidase

class : alpha plus beta number of structures : 2 average size : 738 average PID : 21 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1e3a rasmol 3 A 820 B penicillin G acylase Escherichia coli 1.8 15.8
1fm2 rasmol 7 A 689 B cephalosporin acylase Brevundimonas diminuta 2.00 20.8
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Penicil_amidase  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1e3aa  (   3 )           ssseIkIVrDeyGMPHIyAndtWHLFyGYGYVVAqdRLFQMEM
1fm2a  (   7 )    qapiaaykPrsneILWdgygVPHIYGvdapSAFyGYGwAQArSHGdnILr
                              bbbb     bbbb   aaaaaaaaaaaaaaaaaaaaaa

                           60        70        80        90        100 
1e3aa  (  46 )    ArrSTqGtVAevlgkdfvkFDkdirrnYwpdaIraqiaalspedmsILqG
1fm2a  (  57 )    LYGeArGkGAeyWgpdyeqtTvWLlTNgVperAqqWyaqQspdFranLdA
                  aaaaa    aaaa 333aaaaaaaaa   aaaaaaaaa   aaaaaaaaa

                           110       120       130       140       150 
1e3aa  (  96 )    YAdGMnawIdkVntnpetlLPkQFntfgftPkrWepFdVAMIFVGTMAnr
1fm2a  ( 107 )    FAaGInaYAqq---npd-dIspeVrqVl----pVsGAdVVAHAHRL-NFl
                  aaaaaaaaaaa                        aaaaaaaaaa     

                           160       170       180       190       200 
1e3aa  ( 146 )    fSDsTSEIDNLALLtaLkdkygvsqGmaVFnQLKWLvNpsAptTIavqes
1fm2a  ( 149 )    yVAs---pgrTl--------------------------------------
                         aaaaa                                      

                           210       220       230       240       250 
1e3aa  ( 196 )    nYplkfnqqnsqTaallprYdlpApMldrpAkgadgaLlalaagknretI
1fm2a  ( 158 )    --------------------------------------------------
                                                                    

                           260       270       280       290       300 
1e3aa  ( 246 )    aaqFaqGganglAGyPtGSNMWVIgkskAqdAkAIMVNGPQFGW-yApAY
1fm2a  ( 158 )    -----------------gsNSWAVapgkTangnALLLQNPHlsWttdyfT
                                     bbbbb 333      bbbbb b         

                           310       320       330       340       350 
1e3aa  ( 295 )    TYGIGLHgagYdVTGNTPFAYPGLVFGHNgvISWGsTAGfGDDVDIFaEr
1fm2a  ( 202 )    YYEAHLVTpdfeIYGATQIGLPVIRFAFnq-rGITNTvN-gvGaTnYrLt
                  bbbbbbb    bbbbbbb       bbb     bbbb      bbbbb  

                           360       370       380       390       400 
1e3aa  ( 345 )    lsaekpgyYlhngkwvkmlsreetItVk-n---gqaetftVwrTvhGnIl
1fm2a  ( 252 )    lqd---gGYlYdgqvrpFerrqasyrlrqadgstvdkpleirsSvHgpVf
                         bbbb  bbb  bbbbbbb           bbbbbbb     bb

                           410       420       430       440       450 
1e3aa  ( 391 )    qtdqttqTAYAksRAWdgkEVaSLlAWThQMkAknwqeWtqqAakQALTI
1fm2a  ( 299 )    er--adgtAVAVrVAGldrp--gleQYfdI-tahsfddYea-AarqVpTF
                  b       bbbbbb          aaaa       aaaaaa         

                           460       470       480       490       500 
1e3aa  ( 441 )    NWYYADvnGnIGYVHTGayPdrqsGHD---PRLPVpGt-Gkwdwkgllpf
1fm2a  ( 347 )    NIVYADregtINYSFNGVAPkR-aegdiafWqgnVpGdssrylwtethpL
                  bbbbb     bbbbb                   bb             3

                           510       520       530       540       550 
1e3aa  ( 487 )    emNPkvynPqsgyIANWNNSPQ----kdYpa---SDLFAfLWGgAD-RVt
1fm2a  ( 396 )    ddLPrVtnPpggFVQNSnDpPWTPTwpvtycpanhpsYLApqtpHsLrAQ
                  33  bbb     bbb                                 aa

                           560       570       580       590       600 
1e3aa  ( 529 )    EIdrlLeqkprLtadqAWdVIrqTSrqdLNLrLFlptLqaATsgltqsdp
1fm2a  ( 446 )    qSVrl-senddLtLerF-aLQfs--hrA-vAdrTLpdLipaAlid-pdpe
                  aaaa                              aaaaaaaa       a

                           610       620       630       640       650 
1e3aa  ( 579 )    rrqLVetLtrwdGinllnddgktwqqPGSaILnvWLtsMLkrTVvaaVpm
1fm2a  ( 493 )    VqaAArlLaaWdrdFts-------dsrAALLFEEWArlFAg---------
                  aaaaaaaaa                   aaaaaaaaaaa           

                           660       670       680       690       700 
1e3aa  ( 629 )    pfDkWYsaSGyettqdGPtgSlnIsvGAKILyEAVqgdkSpIpqavdLFa
1fm2a  ( 527 )    ---qnFagq-----aaFat---pwsldkPvsTP--------yGVrd----
                                                                    

                           710       720       730       740       750 
1e3aa  ( 679 )    gkpqqeVVlaALedTwetLskryg---nnvsnWkTpA--maLTFRAnNfF
1fm2a  ( 554 )    ----pkaAVdqLrtAIanTkrkYgaidrpFGdASrilndvnvpGaAGygn
                      aaaaaaaaaaaaaaaaaaa                           

                           760       770       780       790       800 
1e3aa  ( 724 )    GVpQAa-------aeEtrhQaeYQNRGTENDMIVFsPttsdrpvlAwDVV
1fm2a  ( 601 )    LGSFrVFtWsdPdenGiRt---PvhGETWVAIEFst------pVrAyGL-
                                                bbb             bb  

                           810       820       830       840       850 
1e3aa  ( 767 )    APGQSGfiapdgtvdkhyedQlkmYenfgrKsLwltkqdVeahkesqevl
1fm2a  ( 643 )    SYGNsrqp-----gtthysdQIerVsradFreLlLrreqVeaavqertpF
                                       aaaa     bb    aaaaaa   bbbb 

                      
1e3aa  ( 817 )    hvqr
1fm2a  ( 688 )    nf  
                      


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