Home   |   Search   |   Browse   |   Software   |   Help   

Align your sequence(s)

Pyridoxal-dependent decarboxylase, C-terminal sheet domain

class : all beta number of structures : 3 average size : 152 average PID : 78 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
7odc rasmol 2 A 418 A ornithine decarboxylase Mus musculus 1.6 19.9
1d7k rasmol 7 A 427 A ornithine decarboxylase Homo sapiens 2.10 21.2
1f3t rasmol 37 A 418 A ornithine decarboxylase Trypanosoma brucei brucei 2.00 23.7
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Orn_DAP_Arg_deC  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
7odca  (   2 )    ssftkdefdChIldegftakdILdqkin------dkdAfYVAftLAVNIi
1d7ka  (   7 )         eefdchfldegftakdiLdqkInevsssddkdAfYVAftLAVNIi
1f3ta  (  37 )                                       gdpfFvaftLaVnVi
                                                        bbbb bbbbbbb

                           60        70        80        90        100 
7odca  ( 292 )    akktvw----eqtFmYyVndGvygSFNCilydhahvkAllqkrpkpdeky
1d7ka  ( 292 )    akkivlkeqteqtFmYyVndGvygSFNCilydhahvkpllqkrpkpdery
1f3ta  ( 292 )    akkvt------qsFmYyVndGvygSFNCilydhavvrPlpqrepipnekl
                  bbbb         bbbbb         aaaa       bb         b

                           110       120       130       140       150 
7odca  ( 351 )    ysSsIwGPTcdglDrIvercnlPeMhvgdwMlFenMgayTvaaAstfngf
1d7ka  ( 351 )    ysSsIwGPTcdglDrIvercdLpeMhvgdWMLFenMgayTvaaAstfngf
1f3ta  ( 351 )    ypSsVwGPTcdglDqIveryyLpeMqvgewLlFedMgayTvvgtssfngf
                  bbbbbb        bbbbbbbbb      bbbb       333   333 

                           160       170       
7odca  ( 401 )    qrpniyyVms--rpmwqlmk         
1d7ka  ( 401 )    qrptiyyvms--gpawqlmqqfqnpdfpp
1f3ta  ( 401 )    qsPtiyyvvsglpdhvvr           
                     bbbb                      


For comments or questions, please send us email. Copyright © 1997-2005 The HOMSTRAD authors