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Align your sequence(s)

Nucleotidyltransferase, N-terminal domain and domain 2

class : multi domain number of structures : 2 average size : 482 average PID : 44 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1fa0 rasmol 3 A 523 A poly(A) polymerase Saccharomyces cerevisiae 2.60 23.3
1f5a rasmol 20 A 498 A poly(A) polymerase Bos taurus 2.50 21.9
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : NTP_transf_2  PAP_RNA-bind  PAP_central  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1fa0a  (   3 )    sqkvfGitgpvstvgataaenklndsLiqeLkkegsfEteqetanRvqVl
1f5aa  (  20 )        yGitspislaapketdclltqkLvetLkpfgvfEeeeelqrrilIl
                                   aaaaaaaaaaaaaa        aaaaaaaaaaa

                           60        70        80        90        100 
1fa0a  (  53 )    kiLqelAqrFVyeVSkkknmsdgmArdAgGkIftYGSyrLgVhgpgsdID
1f5aa  (  66 )    gkLnnlVkeWIreiSesknlpqsvienVgGkIftFGSyrLgVHtkgADID
                  aaaaaaaaaaaaaaaa     aaaa     bbbb  aaaa        bb

                           110       120       130       140       150 
1fa0a  ( 103 )    TLVVVPkhVtredFftvFdslLrerkeldeIapvpdafVPiIkIkFsgis
1f5aa  ( 116 )    ALCVAPrhVdrsdFFtsFydkLklqeeVkdlraveeafvPVIkLcFdgie
                  bbbbb     aaaa  aaaaaaa    bbbbbbb      bbbbbb  bb

                           160       170       180       190       200 
1fa0a  ( 153 )    IDLICArLdqpqVplsltLsdknlLrnLdekDlrALngTRVTdeIleLVP
1f5aa  ( 166 )    IDILFArLalqtIpedldLrddslLknldirCirSLngCRVTdeIlhlVp
                  bbbbbbb              333     aaaaaaaaaaaaaaaaaa   

                           210       220       230       240       250 
1fa0a  ( 203 )    kpnvFriALrAIklWAqrraVyaniFGFPgGvAWAMLVARICQlyPnacS
1f5aa  ( 216 )    nidnFrlTLrAIKlWAkrhnIysniLGFLgGvSWA-LVARTCQlYpnaiA
                   aaaaaaaaaaaaaaaaa            aaaa   aaaaaaa     a

                           260       270       280       290       300 
1fa0a  ( 253 )    AvILNrFFiiLsewnWpqpViLkpiedgplqvrvwnpkiyaqdrsHrMPV
1f5aa  ( 266 )    StLVhkFFlvFSkweWpnpVlLkqpeecnlnlpvwdprvnpsdryhl-PI
                  aaaaaaaaaaaa                                      

                           310       320       330       340       350 
1fa0a  ( 303 )    ItPAYPSmCaThnITeSTkkVIlqeFvrGvqiTndIfsnkksWanLFekn
1f5aa  ( 316 )    ItPAYpQqNsTynVsvSTrVv--eeFkqGlaiTdeIllskaeWskLFeap
                                         aaaaaaaaaaaaaa             

                           360       370       380       390       400 
1fa0a  ( 353 )    dFffrykfYLEItAyTrgsdeqhlkWsglVeskVrlLVmkLEvlagIkIA
1f5aa  ( 366 )    nFfqkykhYIVLlAsAp-tekqrleWvglVeskIriLVgsLeknefItlA
                   aaaa  bbbbbbbb    aaaaaaaaaaaa  aaaaaaaa     bbbb

                           410       420       430       440       450 
1fa0a  ( 403 )    HPftkpfessycCpteddYemiqdklklvtdenkeeesikdapkAylStM
1f5aa  ( 415 )    HVNPqsfpak----------------------------------eefrtW
                  bb                                             bbb

                           460       470       480       490       500 
1fa0a  ( 465 )    YIGLdfnienkkekvdihipcteFvnlCrsfnedygdhkvFnLaLrfVkg
1f5aa  ( 438 )    VIGLvfk--------dLtydiqsFtdtVyrqAinskfe-vdkIaA-hVkr
                  bbbbbb           aaaaaaaaaaaa             bb   bb3

                           
1fa0a  ( 515 )    ydLpdeVfd
1f5aa  ( 491 )    kqLhqllp 
                  33  33   


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