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Align your sequence(s)

Major intrinsic protein

class : membrane bound all alpha number of structures : 2 average size : 239 average PID : 29 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1ih5 rasmol 9 A 232 A aquaporin-chip Homo sapiens 3.70 36.1
1fx8 rasmol 6 A 259 A glycerol uptake facilitator protein Escherichia coli 2.2 19.7
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : MIP  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1ih5a  (   9 )    lfwravvaeflATTlFvfisIgsalgfkypvgnnqtavqdnvkvSlafGl
1fx8a  (   6 )    tlkgqciaEflGTglLIffGVgcvAalkVa-----gasfgqweiSviWGl
                     aaaaaaaaaaaaaaaaaaaaaa               aaaaaaaaaa

                           60        70        80        90        100 
1ih5a  (  59 )    sIatl--aQsvghisgaHlnPavTlglllscqisifral-myiiAQcvGA
1fx8a  (  51 )    gVAmAiylTagvS--gAHLNPAVTiAlwlfac-fdkrkvipFivsQvaGA
                  aaa                 aaaaaaaaaa          aaaaaaaaaa

                           110       120       130       140       150 
1ih5a  ( 106 )    ivATaiLsg---itssltgn------------slg--Rndladgvnsg-q
1fx8a  (  98 )    fcaAAlVYGlyynlFfdfeqthhivrgsveSvdLAgTFSTyPnphinfvq
                  aaaaaa  a   aaaaa                                 

                           160       170       180       190       200 
1ih5a  ( 138 )    glgiEiiGTlqLVlcvlattdrrrrdlg-g-saplaiGlsVAlGhllAid
1fx8a  ( 148 )    AfavEmvITaiLMglilaltd-dgngvprgplapllIGllIAvIGasmGp
                    aaaaaaaaaaaaaaaaaa               aaaaaaaaaaaaa  

                           210       220       230       240       250 
1ih5a  ( 186 )    yTgcGINPArSfGsavi----thn---------fsnhwiFwvGPfiGgal
1fx8a  ( 197 )    lTgFAMNPARDfGPKvFAwlAgWgnvAFtGgrdipYflVPlfGPivGAiv
                          aaaaaaaa                      aaaa  aaaaaa

                           260 
1ih5a  ( 223 )    Avliydf---ila
1fx8a  ( 247 )    gAfayrkligrhl
                  aaaaa        


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