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Align your sequence(s)

LBP / BPI / CETP family

class : alpha plus beta number of structures : 2 average size : 228 average PID : 17 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1bp1 rasmol 1 - 217 - bactericidal permeability-increasing protein Homo sapiens 2.4 22.5
1bp1 rasmol 218 - 456 - bactericidal permeability-increasing protein Homo sapiens 2.4 22.5
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : LBP_BPI_CETP_C  LBP_BPI_CETP  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1bp11  (   1 )                                    vnpgvvvrisqkgldyaS
1bp12  ( 218 )    etldvqmkgefysenhhnpppfappvmefpaahdrmvylGlSdyffnTag
                                                            aaaaaaaa

                           60        70        80        90        100 
1bp11  (  19 )    qqgtaalqkeLkrIkIpdysdsfkik------------------------
1bp12  ( 268 )    lvyqeag-----vl---kmtLr----ddmIpkeskfrLtTkfFgtfLpeV
                  aaaaa             bbb                             

                           110       120       130       140       150 
1bp11  (  45 )    --hlgkghYsFysMdIreFqLpsSqIsmvpnvglkfsIsnAnIkIsgkWk
1bp12  ( 306 )    akkfp-----nmkIqIhvsastpphlsVqpt-gLtfyp-avdVqAfAvlp
                               bbbbbbb    bbbbb   bbbbb  bbbbbbbbb  

                           160       170       180       190       200 
1bp11  (  93 )    AqkrflkmsgnFdLsIegMsIsAdlklgsnptsgkptItCssÇsShInsV
1bp12  ( 349 )    -------nsalasLFlIgMhTtgsMevsAe--snrLvgeLkldrLlLelk
                            bbbbbbbbbb  bbbbbbb      bbbbbbb      bb

                           210       220       230       240       250 
1bp11  ( 143 )    hVhIskskVgwLiqlFhkkIesaLrnkMnsqVçekVtnsvssklqpyfqt
1bp12  ( 390 )    hSnIg------------pfpvelLqdIMnyIvpilvlprvneklqkG-fp
                  bb                      aaaaaaaaaaaaaaaaaaaaaa    

                           260       270       280     
1bp11  ( 193 )    lpvmtkidsvaginyglvappatta            
1bp12  ( 427 )    Lptpa-------rvqLynvvlqphqnFLLFGAdvvyk
                               b                       


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