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Align your sequence(s)

NAD dependent epimerase/dehydratase family

class : alpha beta number of structures : 4 average size : 332 average PID : 22 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1bxk rasmol 1 A 350 A DTDP-glucose 4,6-dehydratase Escherichia coli 1.90 19.5
1udc rasmol 1 - 338 - UDP-glucose 4-epimerase Escherichia coli 1.65 17.7
1bws rasmol 3 A 316 A fucose synthetase Escherichia coli 2.2 N/A
1db3 rasmol 1 A 357 A GDP-mannose 4,6-dehydratase Escherichia coli 2.30 20.5
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : 3Beta_HSD  Epimerase  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1bxka  (   1 )    mrkILITgGAgfiGSALVryIInetsDAVVVVdkltyaGNlmSLapVaqs
1udc   (   1 )     mrVLVTGGSGYIGSHTCVqLLqn-ghdVIILDnlc-nskrsVlpvIerl
1bwsa  (   3 )    kqrVFIAgHrgmVGsAIrrqLeqrgdVelvlrtrd---------------
1db3a  (   1 )    skvALITGVtgQdGsYLaefLlek-gYeVhGIkr                
                    bbbbb    aaaaaaaaaaaa    bbbbb                  

                           60        70        80        90        100 
1bxka  (  51 )    e--rfafekVdIcdraeLarVFtehqPdCVMHLaaesh-vdrsidgpaaf
1udc   (  48 )    GgkhPtfvegdIrnealMteILhdhaIdTVIHFAGlka-vgeSvqkpleY
1bwsa  (  38 )    --------elnLldsraVhdfFaserIdqVYLAAAkvggivaNntypadF
1db3a  (  55 )      pkfhlhygdLsdtsnLtrILreVqPdEVYNLgamsh-vavsfespeyT
                       bb       aaaaaaaaaaa   bbbb              aaaa

                           110       120       130       140       150 
1bxka  (  98 )    ietNivGTytLLeaAraywnaltedkksaFrFHHiStdeVYgdLhstddf
1udc   (  97 )    ydNNvnGTlrLIsAMraAn---------VknFIFSSSAtVYgdqpk--ip
1bwsa  (  80 )    iyqNmmIEsNIIhAAhqnd---------VnkLLFLGsscIYPklAk--qp
1db3a  ( 102 )    adVdamGTlrLLeAIrflg------lekkTrFYQaStSeLYglVqe--ip
                  aaaa aaaaaaaaaaaa             bbbbbbb3333         

                           160       170       180       190       200 
1bxka  ( 148 )    Ftettpy--aps---spySaSKAsSDhlVrawlrtyg-LpTLITNcSnNY
1udc   ( 136 )    YvEsfpt-gtPq---spYGkSKlmVEqiLtdlqkaqpdWSIALLRYFNPV
1bwsa  ( 119 )    MaEseLlqgtleptnepyAiAKiaGIklCEsynrqyg-rdYRSVMPTnLY
1db3a  ( 144 )    QketTpf--ypr---spYAvaKlyAywiTVnyresyg-MyACNGILFnHE
                                  aaaaaaaaaaaaaaaaaaaa    bbbbbb bbb

                           210       220       230       240       250 
1bxka  ( 192 )    GP------yhfP----eklIPlmILnAlag-----ksLpVyg------nG
1udc   ( 182 )    GAhpsGdMGedpqgiPnnLMpyIAQVAvg----rrdsLaIfgndYptedg
1bwsa  ( 168 )    Gp------hDnFhpsnshvIPaLLrrFheataqggpdvvvwg------sG
1db3a  ( 188 )    Sp------rRge----tfvTrkITraIAnIAQglescLyLgn-------M
                                    aaaaaaaaaa         bbb          

                           260       270       280       290       300 
1bxka  ( 221 )    qqirDWLYVeDHAraLycVAttGk---------vgetYNIGghnerknld
1udc   ( 228 )    TGvRDYIHVMDLAdGHVvAMekLan------kpgvhiYNLGagvGnSVld
1bwsa  ( 206 )    tpmrEfLHVdDMAaASihVMelahevWlenTqpmlSHINVGtgvdctird
1db3a  ( 221 )    dslrDWgHAkDYVkMQwmMLq-qe---------qpedFVIAtgvqysVrq
                    bb bbbaaaaaaaaaaaaa                bbb     bbaaa

                           310       320       330       340       350 
1bxka  ( 262 )    VVetICelLeelapnkph--------------------------gvahYr
1udc   ( 272 )    VVnaFskaCgkpVnyhfaprre----------------------------
1bwsa  ( 256 )    LAqtIakvVgYkgrVvFda-------------------------------
1db3a  ( 261 )    FVemAAaqLg--IkLrfegtgveekGiVvsvtghdApgVkpgdvIIAVdp
                  aaaaaaaaa     bbbb                                

                           360       370       380       390       400 
1bxka  ( 286 )    dlitf    ryAIdAskIarelgcvpqetFesGMrkTVqwYlaneswwkq
1udc   ( 294 )    ----gdl-paywAdaskAdreLnWrvtrtldeMAqdtwhWqsrhpqGypd
1bwsa  ( 275 )    -skpdgt-prkLLdVtrLhq-LgwyheisleaGLasTyqwFlenq     
1db3a  ( 309 )    ryfrpae etllGdptkAhekLgWkpeitLreMVseMVanDle---aAkk
                                 aaaaaa        aaaaaaaaaaaaaa       

                           410 
1bxka  ( 341 )    VqdgsYqgea
1udc                        
1bwsa                       
1db3a  ( 356 )    hs        
                            


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