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Align your sequence(s)

DNA polymerase family B, C-terminal region

class : multi domain number of structures : 2 average size : 450 average PID : 24 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1ih7 rasmol 360 A 903 A DNA polymerase Bacteriophage rb69 2.21 21.5
1qht rasmol 348 A 750 A DNA polymerase Thermococcus sp. 2.10 24.5
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : DNA_pol_B  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1ih7a  ( 360 )    spiktWdaiIfnslkeqnkvipqgrshpvq-----pypgafvkePipnry
1qhta  ( 348 )    stgnlVEwfLlrkAykrnelapnkPderelarrrgGyaggyvkePerglw
                   aaaaaaaaaaaaaa                                   

                           60        70        80        90        100 
1ih7a  ( 405 )    kYVMSFdLtsLypsIIrQVNISpeTiAgtfkvaplhdYinavaerPsdvy
1qhta  ( 398 )    dnIVyLDFrsLYPsiIithnVSpdTlnre----------------gçkey
                    bbbbb   aaaaaaaa                                

                           110       120       130       140       150 
1ih7a  ( 455 )    SCSP-ngMmYykdrdGvVPtEItkVfnqrkehkgymlAAqrNgeiIkeal
1qhta  ( 432 )    dvApevghkFÇkdfpGfIPsLLgdlleerqkikrkmkatv----------
                  bb      bb      aaaaaaaaaaaaaaaaaaaaa             

                           160       170       180       190       200 
1ih7a  ( 504 )    hnpnlsvdepldvdyrfdFsdeikekIkklsakSLneMlfrAqrtevagm
1qhta  ( 472 )    -----------------------------------------dplekklld
                                                            aaaaaaaa

                           210       220       230       240       250 
1ih7a  ( 554 )    taQinrkllinsLygAlGnvwFrYYdlrnAtAITtFGqMALqWIerkVne
1qhta  ( 481 )    yrqraikilAnsFygYYGyakArwyÇkeÇAeSVtawGreyIemVireLee
                  aaaaaaaaaa  aaaaa         aaaaaaaaaaaaaaaaaaaaaaaa

                           260       270       280       290       300 
1ih7a  ( 604 )    yLnevCgtegeaFVlYGdtdsIYVsAdkIIdkvgeskFrdtnhWVdfLdk
1qhta  ( 531 )    kf-------gF-kVLYADtdGLHATip--------g------adaetVkk
                  aa           bbbbb  bbbbb                   aaaaaa

                           310       320       330       340       350 
1ih7a  ( 654 )    fArerMepaIdrgFreMceyMnNkqhlMfMdReAIAGPplgskGiGGFWt
1qhta  ( 559 )    kAke-Flkyinl----------------eLeyegFyv--------rGFFv
                  aaaa aaaaa                    bbbbbb          bbbb

                           360       370       380       390       400 
1ih7a  ( 704 )    gkkrYALNVwDmegtryaepklkimgLeTqksstPkaVqkALkeCIrrML
1qhta  ( 590 )    tkkkyAVIde--------egkittrgLeivrrdwSeiAkeTqarVLeAIL
                  b  bbbbb              bbb          aaaaaaaaaaaaaaa

                           410       420       430       440       450 
1ih7a  ( 754 )    qe-GeesLqeyFkeFekeFrqlnYisIAsvssAnniakydvggfpgpkCp
1qhta  ( 632 )    khgdveeAvrivkevtl---------vIheqia-----------------
                  a   aaaaaaaaaa                                    

                           460       470       480       490       500 
1ih7a  ( 803 )    fhIrGILTYnraip----qVvegekVyVLpLregNpfgdkCIAWpsgteI
1qhta  ( 676 )    --tgphvAVakrlaargvkirpgtvisYiVl-----kGdrAiPa------
                     aaaaaaaaa               bbb          bbb       

                           510       520       530       540       
1ih7a  ( 855 )    tdlikddVlhwMdytvLLektFikpLegFTsaAkLdyekkaslfdmfdf
1qhta  ( 718 )    -def----------eyyienQVlpAVerIlkafgy              
                                 aaaa   aaa aaaaa                  


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