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Align your sequence(s)

ATP dependent DNA ligase N-terminal domain

class : alpha plus beta number of structures : 2 average size : 207 average PID : 23 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1fvi rasmol 2 A 189 A DNA ligase-adenylate Chlorella virus 2.00 19
1a0i rasmol 2 - 240 - DNA ligase Bacteriophage T7 2.6 22.2
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : DNA_ligase  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1fvia  (   2 )      aItkPLlAatLen--iedVq---fpClAtpkIaGirSVkq---t---q
1a0i   (   2 )    vnikTnPFkAvsfvesaIkkaldnAgyLIAEIkydgvrGNICVdntAnSy
                            bb               bbbbb    bbbbb         

                           60        70        80        90        100 
1fvia  (  39 )    MlsrtfkpIrn--------svMnrLLt-elLp----egSDGeIsiegatf
1a0i   (  52 )    WlsrvsktIpALehlngfdvrWkrLLnddrCfykdGFMLDGeLmVkgvdf
                  bb                 aaaaaaaa           bbbbbb      

                           110       120       130       140       150 
1fvia  (  76 )    qdTtsaVmtgha---------------------kFSYyWfDyVtd-----
1a0i   ( 102 )    ntgSglLrtkwTdtkNqefhrkkdkvpFkLhtghLhIkLyAILplhiVes
                    aaaaaa                          bbbbbbbb        

                           160       170       180       190       200 
1fvia  ( 104 )    --dplkkYidRVedMknyitvhphilehaqVkIipliPveInniteLlqy
1a0i   ( 160 )    gedCdvmtllMqehVknMlpLLqeyfp--eIeWqaAesyeVydmveLqql
                         aaaaaaaaaaaaaa          bbbb   bbb  aaaaaaa

                           210       220       230      
1fvia  ( 152 )    erdVlskgfeGVmIRkpdGkYkfgrStlkegIlLkMkq
1a0i   ( 208 )    yeqKraegheGLiVKdPmciYkRgkks----gWWkmk 
                  aaaaa      bbbb                  bbb  


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