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Align your sequence(s)

PQQ enzyme

class : all beta number of structures : 3 average size : 582 average PID : 44 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1h4i rasmol 1 A 595 A methanol dehydrogenase subunit 1 Methylobacterium extorquens 1.94 19.85
1g72 rasmol 1 A 571 A quinoprotein methanol dehydrogenase Methylophilus methylotrophus 1.90 16.1
1flg rasmol 1 A 582 A quinoprotein ethanol dehydrogenase Pseudomonas aeruginosa 2.60 19.2
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Bacterial_PQQ  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1h4ia  (   1 )        NdkLvelsksddnWVMPGKnydSnNfSdlkqInkgnVkqLrpAwtf
1g72a  (   1 )        dadLdkqvntaGAWpiaTGgyySqHnsplaqInksnVknVkaawsf
1flga  (   1 )    kdvtwedIanDdkttgdVLQyGmgthaqRwSplkqVnadnVfkLtpawsy
                       aaaa                    bb         333 bbbbbb

                           60        70        80        90        100 
1h4ia  (  47 )    sTg--llnGHEGAPLVVdgkMYIHTSfpNnTFALgLddPgtilwqdkpkQ
1g72a  (  47 )    sTg--vlnGHEgaPLVigdmMYVHSAfpNnTYALnLndpgkivwqhkPkQ
1flga  (  51 )    sFgdekqrGQESQAIVsdgvIYVTASy-SRLFALdAktG-krlwtynhrl
                  b             bbb  bbbbb      bbbbb      bbbbb    

                           110       120       130       140       150 
1h4ia  (  95 )    npaAravacCDLVNRGLAyWPGdgktpaLILKTQLdGnVAALnAetGetv
1g72a  (  95 )    dasTkavMCCDVVDRGLaYGag------qIVKKQAnGhLLALdaktGkin
1flga  (  99 )    pddi--rpcCdVVNRGAAIyg------dkVFFGTLDASVVALnkntGkvv
                                   bbb        bbbbb    bbbbbb     bb

                           160       170       180       190       200 
1h4ia  ( 145 )    wkveNSdikvGSTLTIAPYVVk------dkVIIGSSgAELGvrGyLTAYd
1g72a  ( 139 )    wevedpkvGsTLTQAPfVAk------dTVLMGçSgAELGvrGaVNAFd
1flga  ( 141 )    wkkkFadhgaGyTMTGAPtIVkDgktgkvLLIHGSSgDEfGVvGrLFARd
                  bbbb   333        bbb        bbbb    333    bbbbb 

                           210       220       230       240       250 
1h4ia  ( 189 )    VktGeqvwrAyATGpdkdLlLa-----sdFNiknphYgqkglGtgtWe--
1g72a  ( 183 )    LktGelkwrAfATGsddsVrLa-----kdFNsanphYgqfglGtktWe--
1flga  ( 191 )    pdtGeeiWMRPFVEGh---mGrlngkdstvTg-dv-------kApsWPdd
                       bbbbbb                                       

                           260       270       280       290       300 
1h4ia  ( 232 )    -------gdawkiGGGTNWGWYAYdpgtnLIYFGTGNPAPWNetmRp---
1g72a  ( 226 )    -------gdawkiGGGTNWGwYAYDpklnLFYYGSGNPAPWNetmRp---
1flga  ( 230 )    rnsptgkveSwshGGGAPWQsASFDaetnTIIVGAGNPGPWNTwaRTakg
                          33333         bb     bbbbb        333     

                           310       320       330       340       350 
1h4ia  ( 272 )    -----gdNKWTMTIFGRdAdtGeAkFGYQKTPhDeWDYAGVNVMMLseQk
1g72a  ( 266 )    -----gdNkWTMTIWGRdLdtGmAkWGYQKTphDeWDFAGVNQMVLTdQp
1flga  ( 280 )    gnphdydSlyTSGQVGVdPssGevkwfyqHTpNDAWDFSGNNeLVLFdYk
                              bbbbb      bbbbbb               bbbbbb

                           360       370       380       390       400 
1h4ia  ( 317 )    dkdgkarkLLTHPDRNGIVYTLdRtdGaLvsAnkLDdtVnVFksVdlktG
1g72a  ( 311 )    vn-gkmtpLLSHIDRNGILYTLnRenGnLivAekVDpaVnVFkkVdlktG
1flga  ( 330 )    akdgkivkATAHADRNGFFYVVdRsnGkLqnAfpFVdnItWAshIdlktg
                       bbbbbbbb    bbbbbb     bbbbbb       bbbb     

                           410       420       430       440       450 
1h4ia  ( 367 )    qPvrdpeygTrmd------hlAkdIÇPSAMGYHNQGHDSYDpkrelFFMG
1g72a  ( 360 )    tPvrdpefaTrmd------hkGtnIÇPSAMGFHNQGVDSYDpesrTLYAG
1flga  ( 380 )    rPveregqrPplpepgqkhGkaveVSPPFLGGKNWNPMAySqdtglFYVP
                   bbb                  bbb             bb      bbbb

                           460       470       480       490       500 
1h4ia  ( 411 )    INHMdWePfmlpyragqfFvGAtLnMYPGpkgdrqnyegLGQIKAYnA
1g72a  ( 404 )    LNHMdWePfmlpyragqfFvGAtLaMypGpnGpt--kkeMGQIrAFdL
1flga  ( 430 )    ANHWkEdYwTeevsytkgsaYlGMgfrIkrmyd------dhVGSLRAMdP
                  bb bbbbbbb             bbbbbbb            bbbbbb  

                           510       520       530       540       550 
1h4ia  ( 461 )    itGdykwekmerFAVWGGTMATaGdLVFYGTLDGyLkArdSdtGdllwkf
1g72a  ( 452 )    ttGkakwtkwekFAAWGGTLYTkggLVWYATLdGyLkALdnkdGkelwnf
1flga  ( 474 )    vsgkvvwehkehlPLWAGVLATaGnLVFTGTgdGyFKAFdAksGkelwkf
                      bbbbbbb        bbb   bbbbb    bbbbbb     bbbbb

                           560       570       580       590       600 
1h4ia  ( 511 )    kIpSGAIGYPMTYthkgtQYVAIYyGVGGWPGVglVfdladptaglGAvg
1g72a  ( 502 )    kMpSGGIgSPMTYsfkgkQyIGSMyGVGGWPGVglVfdltdpsaglGAvg
1flga  ( 524 )    qTgsGIVSPPITWeqdgeQyLGVTVGygGAVpl-------------wGgd
                  b         bbbb    bbbbbbb       a                a

                           610       620       630   
1h4ia  ( 561 )    AFkkLanytqmgGGVVVFSldgkgpyddpnvgewk
1g72a  ( 552 )    AFreLqnhtqmgGGLmVFSl               
1flga  ( 561 )    MadlTrp-vaqgGsFwVFklpsw            
                  a            bbbbbb                


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